Gene : Eucgr.K00727 E. grandis v2.0
Defline:  (1 of 1) 5.4.3.8 - Glutamate-1-semialdehyde 2,1-aminomutase / Glutamate-1-semialdehyde aminotransferase Genomic Order:  609
Name:  ? Eucgr.K00727 Secondary Identifier:  ? PAC:32066446
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5188 Eucalyptus grandis pathologic  
Egrandis PWY-5918 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00727 0.5kb upstream 0.5kb upstream 3443 true Chr11: 8670894-8674336 Eucalyptus grandis
Eucgr.K00727 0.5kb upstream 0.5kb upstream 500 false Chr11: 8673837-8674336 Eucalyptus grandis
Eucgr.K00727 0.5kb downstream 0.5kb downstream 3443 true Chr11: 8670394-8673836 Eucalyptus grandis
Eucgr.K00727 0.5kb downstream 0.5kb downstream 500 false Chr11: 8670394-8670893 Eucalyptus grandis
Eucgr.K00727 1.0kb upstream 1.0kb upstream 3943 true Chr11: 8670894-8674836 Eucalyptus grandis
Eucgr.K00727 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8673837-8674836 Eucalyptus grandis
Eucgr.K00727 1.0kb downstream 1.0kb downstream 3943 true Chr11: 8669894-8673836 Eucalyptus grandis
Eucgr.K00727 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8669894-8670893 Eucalyptus grandis
Eucgr.K00727 2.0kb upstream 2.0kb upstream 4943 true Chr11: 8670894-8675836 Eucalyptus grandis
Eucgr.K00727 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8673837-8675836 Eucalyptus grandis
Eucgr.K00727 2.0kb downstream 2.0kb downstream 4943 true Chr11: 8668894-8673836 Eucalyptus grandis
Eucgr.K00727 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8668894-8670893 Eucalyptus grandis
Eucgr.K00727 5.0kb upstream 5.0kb upstream 7943 true Chr11: 8670894-8678836 Eucalyptus grandis
Eucgr.K00727 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8673837-8678836 Eucalyptus grandis
Eucgr.K00727 5.0kb downstream 5.0kb downstream 7943 true Chr11: 8665894-8673836 Eucalyptus grandis
Eucgr.K00727 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8665894-8670893 Eucalyptus grandis
Eucgr.K00727 10.0kb upstream 10.0kb upstream 12943 true Chr11: 8670894-8683836 Eucalyptus grandis
Eucgr.K00727 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8673837-8683836 Eucalyptus grandis
Eucgr.K00727 10.0kb downstream 10.0kb downstream 12943 true Chr11: 8660894-8673836 Eucalyptus grandis
Eucgr.K00727 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8660894-8670893 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066610 5270 Rosid View MSA
123741000 5271 Pentapetalae View MSA
122796730 5272 Eudicot View MSA
122042723 5273 Angiosperm View MSA
121344584 5274 Embryophyte View MSA
123423890 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.9568 0.0 155.782 High  
cufflinks 12.0152 0.0 27.2957    
cufflinks 37.3013 0.0 82.5969 High  
cufflinks 11.3306 0.0 25.8152    
cufflinks 15.3015 0.0 34.3336    
cufflinks 104.552 0.0 243.195 High High

0 Strain