Gene : Eucgr.K00649 E. grandis v2.0
Defline:  (1 of 1) PTHR15492:SF1 - CYCLIN-D1-BINDING PROTEIN 1 Genomic Order:  552
Name:  ? Eucgr.K00649 Secondary Identifier:  ? PAC:32068347
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00649 0.5kb upstream 0.5kb upstream 3505 true Chr11: 7328004-7331508 Eucalyptus grandis
Eucgr.K00649 0.5kb upstream 0.5kb upstream 500 false Chr11: 7331009-7331508 Eucalyptus grandis
Eucgr.K00649 0.5kb downstream 0.5kb downstream 3505 true Chr11: 7327504-7331008 Eucalyptus grandis
Eucgr.K00649 0.5kb downstream 0.5kb downstream 500 false Chr11: 7327504-7328003 Eucalyptus grandis
Eucgr.K00649 1.0kb upstream 1.0kb upstream 4005 true Chr11: 7328004-7332008 Eucalyptus grandis
Eucgr.K00649 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7331009-7332008 Eucalyptus grandis
Eucgr.K00649 1.0kb downstream 1.0kb downstream 4005 true Chr11: 7327004-7331008 Eucalyptus grandis
Eucgr.K00649 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7327004-7328003 Eucalyptus grandis
Eucgr.K00649 2.0kb upstream 2.0kb upstream 5005 true Chr11: 7328004-7333008 Eucalyptus grandis
Eucgr.K00649 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7331009-7333008 Eucalyptus grandis
Eucgr.K00649 2.0kb downstream 2.0kb downstream 5005 true Chr11: 7326004-7331008 Eucalyptus grandis
Eucgr.K00649 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7326004-7328003 Eucalyptus grandis
Eucgr.K00649 5.0kb upstream 5.0kb upstream 8005 true Chr11: 7328004-7336008 Eucalyptus grandis
Eucgr.K00649 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7331009-7336008 Eucalyptus grandis
Eucgr.K00649 5.0kb downstream 5.0kb downstream 8005 true Chr11: 7323004-7331008 Eucalyptus grandis
Eucgr.K00649 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7323004-7328003 Eucalyptus grandis
Eucgr.K00649 10.0kb upstream 10.0kb upstream 13005 true Chr11: 7328004-7341008 Eucalyptus grandis
Eucgr.K00649 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7331009-7341008 Eucalyptus grandis
Eucgr.K00649 10.0kb downstream 10.0kb downstream 13005 true Chr11: 7318004-7331008 Eucalyptus grandis
Eucgr.K00649 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7318004-7328003 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062519 5270 Rosid View MSA
123740385 5271 Pentapetalae View MSA
122788529 5272 Eudicot View MSA
122041727 5273 Angiosperm View MSA
121346994 5274 Embryophyte View MSA
123425280 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.48043 0.0 11.1329   Low
cufflinks 7.00992 0.0 16.615   High
cufflinks 6.33661 0.0 15.1529    
cufflinks 4.49592 0.0 11.0817   Low
cufflinks 6.63116 0.0 15.8491    
cufflinks 5.0416 0.0 12.42    

0 Strain