Gene : Eucgr.K00600 E. grandis v2.0
Defline:  (1 of 7) PF03007//PF06974 - Wax ester synthase-like Acyl-CoA acyltransferase domain (WES_acyltransf) // Protein of unknown function (DUF1298) (DUF1298) Genomic Order:  513
Name:  ? Eucgr.K00600 Secondary Identifier:  ? PAC:32067096
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00600 0.5kb upstream 0.5kb upstream 4967 true Chr11: 6714536-6719502 Eucalyptus grandis
Eucgr.K00600 0.5kb upstream 0.5kb upstream 500 false Chr11: 6719003-6719502 Eucalyptus grandis
Eucgr.K00600 0.5kb downstream 0.5kb downstream 4967 true Chr11: 6714036-6719002 Eucalyptus grandis
Eucgr.K00600 0.5kb downstream 0.5kb downstream 500 false Chr11: 6714036-6714535 Eucalyptus grandis
Eucgr.K00600 1.0kb upstream 1.0kb upstream 5467 true Chr11: 6714536-6720002 Eucalyptus grandis
Eucgr.K00600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6719003-6720002 Eucalyptus grandis
Eucgr.K00600 1.0kb downstream 1.0kb downstream 5467 true Chr11: 6713536-6719002 Eucalyptus grandis
Eucgr.K00600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6713536-6714535 Eucalyptus grandis
Eucgr.K00600 2.0kb upstream 2.0kb upstream 6467 true Chr11: 6714536-6721002 Eucalyptus grandis
Eucgr.K00600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6719003-6721002 Eucalyptus grandis
Eucgr.K00600 2.0kb downstream 2.0kb downstream 6467 true Chr11: 6712536-6719002 Eucalyptus grandis
Eucgr.K00600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6712536-6714535 Eucalyptus grandis
Eucgr.K00600 5.0kb upstream 5.0kb upstream 9467 true Chr11: 6714536-6724002 Eucalyptus grandis
Eucgr.K00600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6719003-6724002 Eucalyptus grandis
Eucgr.K00600 5.0kb downstream 5.0kb downstream 9467 true Chr11: 6709536-6719002 Eucalyptus grandis
Eucgr.K00600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6709536-6714535 Eucalyptus grandis
Eucgr.K00600 10.0kb upstream 10.0kb upstream 14467 true Chr11: 6714536-6729002 Eucalyptus grandis
Eucgr.K00600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6719003-6729002 Eucalyptus grandis
Eucgr.K00600 10.0kb downstream 10.0kb downstream 14467 true Chr11: 6704536-6719002 Eucalyptus grandis
Eucgr.K00600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6704536-6714535 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072323 5270 Rosid View MSA
123749190 5271 Pentapetalae View MSA
122797420 5272 Eudicot View MSA
122048260 5273 Angiosperm View MSA
123428993 5275 Viridiplantae View MSA
121310908 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.426803 0.0 1.66087 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.079846 0.0 0.690244 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 11.4512 0.0 30.6714   High

0 Strain