Gene : Eucgr.K00566 E. grandis v2.0
Defline:  (1 of 3) PTHR11601//PTHR11601:SF47 - CYSTEINE DESULFURYLASE Genomic Order:  483
Name:  ? Eucgr.K00566 Secondary Identifier:  ? PAC:32069605
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00566 0.5kb upstream 0.5kb upstream 3736 true Chr11: 6296519-6300254 Eucalyptus grandis
Eucgr.K00566 0.5kb upstream 0.5kb upstream 500 false Chr11: 6296519-6297018 Eucalyptus grandis
Eucgr.K00566 0.5kb downstream 0.5kb downstream 3736 true Chr11: 6297019-6300754 Eucalyptus grandis
Eucgr.K00566 0.5kb downstream 0.5kb downstream 500 false Chr11: 6300255-6300754 Eucalyptus grandis
Eucgr.K00566 1.0kb upstream 1.0kb upstream 4236 true Chr11: 6296019-6300254 Eucalyptus grandis
Eucgr.K00566 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6296019-6297018 Eucalyptus grandis
Eucgr.K00566 1.0kb downstream 1.0kb downstream 4236 true Chr11: 6297019-6301254 Eucalyptus grandis
Eucgr.K00566 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6300255-6301254 Eucalyptus grandis
Eucgr.K00566 2.0kb upstream 2.0kb upstream 5236 true Chr11: 6295019-6300254 Eucalyptus grandis
Eucgr.K00566 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6295019-6297018 Eucalyptus grandis
Eucgr.K00566 2.0kb downstream 2.0kb downstream 5236 true Chr11: 6297019-6302254 Eucalyptus grandis
Eucgr.K00566 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6300255-6302254 Eucalyptus grandis
Eucgr.K00566 5.0kb upstream 5.0kb upstream 8236 true Chr11: 6292019-6300254 Eucalyptus grandis
Eucgr.K00566 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6292019-6297018 Eucalyptus grandis
Eucgr.K00566 5.0kb downstream 5.0kb downstream 8236 true Chr11: 6297019-6305254 Eucalyptus grandis
Eucgr.K00566 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6300255-6305254 Eucalyptus grandis
Eucgr.K00566 10.0kb upstream 10.0kb upstream 13236 true Chr11: 6287019-6300254 Eucalyptus grandis
Eucgr.K00566 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6287019-6297018 Eucalyptus grandis
Eucgr.K00566 10.0kb downstream 10.0kb downstream 13236 true Chr11: 6297019-6310254 Eucalyptus grandis
Eucgr.K00566 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6300255-6310254 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063625 5270 Rosid View MSA
123741535 5271 Pentapetalae View MSA
122792322 5272 Eudicot View MSA
122047079 5273 Angiosperm View MSA
121347897 5274 Embryophyte View MSA
123426680 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5101 0.0 28.4884    
cufflinks 10.5901 0.0 24.9677    
cufflinks 10.7926 0.0 32.3654    
cufflinks 6.19721 0.0 17.9415   Low
cufflinks 7.83936 0.0 19.8192    
cufflinks 11.8876 0.0 30.9153    

0 Strain