Gene : Eucgr.K00546 E. grandis v2.0
Defline:  (1 of 2) PTHR23339:SF54 - PALADIN Genomic Order:  464
Name:  ? Eucgr.K00546 Secondary Identifier:  ? PAC:32066451
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00546 0.5kb upstream 0.5kb upstream 11697 true Chr11: 6150543-6162239 Eucalyptus grandis
Eucgr.K00546 0.5kb upstream 0.5kb upstream 500 false Chr11: 6150543-6151042 Eucalyptus grandis
Eucgr.K00546 0.5kb downstream 0.5kb downstream 11697 true Chr11: 6151043-6162739 Eucalyptus grandis
Eucgr.K00546 0.5kb downstream 0.5kb downstream 500 false Chr11: 6162240-6162739 Eucalyptus grandis
Eucgr.K00546 1.0kb upstream 1.0kb upstream 12197 true Chr11: 6150043-6162239 Eucalyptus grandis
Eucgr.K00546 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6150043-6151042 Eucalyptus grandis
Eucgr.K00546 1.0kb downstream 1.0kb downstream 12197 true Chr11: 6151043-6163239 Eucalyptus grandis
Eucgr.K00546 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6162240-6163239 Eucalyptus grandis
Eucgr.K00546 2.0kb upstream 2.0kb upstream 13197 true Chr11: 6149043-6162239 Eucalyptus grandis
Eucgr.K00546 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6149043-6151042 Eucalyptus grandis
Eucgr.K00546 2.0kb downstream 2.0kb downstream 13197 true Chr11: 6151043-6164239 Eucalyptus grandis
Eucgr.K00546 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6162240-6164239 Eucalyptus grandis
Eucgr.K00546 5.0kb upstream 5.0kb upstream 16197 true Chr11: 6146043-6162239 Eucalyptus grandis
Eucgr.K00546 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6146043-6151042 Eucalyptus grandis
Eucgr.K00546 5.0kb downstream 5.0kb downstream 16197 true Chr11: 6151043-6167239 Eucalyptus grandis
Eucgr.K00546 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6162240-6167239 Eucalyptus grandis
Eucgr.K00546 10.0kb upstream 10.0kb upstream 21197 true Chr11: 6141043-6162239 Eucalyptus grandis
Eucgr.K00546 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6141043-6151042 Eucalyptus grandis
Eucgr.K00546 10.0kb downstream 10.0kb downstream 21197 true Chr11: 6151043-6172239 Eucalyptus grandis
Eucgr.K00546 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6162240-6172239 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064343 5270 Rosid View MSA
123736894 5271 Pentapetalae View MSA
122792076 5272 Eudicot View MSA
122046050 5273 Angiosperm View MSA
121344285 5274 Embryophyte View MSA
123426965 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.5026 0.0 74.8759 High  
cufflinks 8.64489 0.0 19.4623   Low
cufflinks 33.7941 0.0 78.4156 High  
cufflinks 15.3647 0.0 35.6627    
cufflinks 29.7344 0.0 68.2298    
cufflinks 24.5032 0.0 58.3484    

0 Strain