Gene : Eucgr.K01362 E. grandis v2.0
Defline:  (1 of 1) PTHR21649:SF14 - PSI TYPE III CHLOROPHYLL A/B-BINDING PROTEIN Genomic Order:  1144
Name:  ? Eucgr.K01362 Secondary Identifier:  ? PAC:32068054
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01362 0.5kb upstream 0.5kb upstream 2376 true Chr11: 16983480-16985855 Eucalyptus grandis
Eucgr.K01362 0.5kb upstream 0.5kb upstream 500 false Chr11: 16983480-16983979 Eucalyptus grandis
Eucgr.K01362 0.5kb downstream 0.5kb downstream 2376 true Chr11: 16983980-16986355 Eucalyptus grandis
Eucgr.K01362 0.5kb downstream 0.5kb downstream 500 false Chr11: 16985856-16986355 Eucalyptus grandis
Eucgr.K01362 1.0kb upstream 1.0kb upstream 2876 true Chr11: 16982980-16985855 Eucalyptus grandis
Eucgr.K01362 1.0kb upstream 1.0kb upstream 1000 false Chr11: 16982980-16983979 Eucalyptus grandis
Eucgr.K01362 1.0kb downstream 1.0kb downstream 2876 true Chr11: 16983980-16986855 Eucalyptus grandis
Eucgr.K01362 1.0kb downstream 1.0kb downstream 1000 false Chr11: 16985856-16986855 Eucalyptus grandis
Eucgr.K01362 2.0kb upstream 2.0kb upstream 3876 true Chr11: 16981980-16985855 Eucalyptus grandis
Eucgr.K01362 2.0kb upstream 2.0kb upstream 2000 false Chr11: 16981980-16983979 Eucalyptus grandis
Eucgr.K01362 2.0kb downstream 2.0kb downstream 3876 true Chr11: 16983980-16987855 Eucalyptus grandis
Eucgr.K01362 2.0kb downstream 2.0kb downstream 2000 false Chr11: 16985856-16987855 Eucalyptus grandis
Eucgr.K01362 5.0kb upstream 5.0kb upstream 6876 true Chr11: 16978980-16985855 Eucalyptus grandis
Eucgr.K01362 5.0kb upstream 5.0kb upstream 5000 false Chr11: 16978980-16983979 Eucalyptus grandis
Eucgr.K01362 5.0kb downstream 5.0kb downstream 6876 true Chr11: 16983980-16990855 Eucalyptus grandis
Eucgr.K01362 5.0kb downstream 5.0kb downstream 5000 false Chr11: 16985856-16990855 Eucalyptus grandis
Eucgr.K01362 10.0kb upstream 10.0kb upstream 11876 true Chr11: 16973980-16985855 Eucalyptus grandis
Eucgr.K01362 10.0kb upstream 10.0kb upstream 10000 false Chr11: 16973980-16983979 Eucalyptus grandis
Eucgr.K01362 10.0kb downstream 10.0kb downstream 11876 true Chr11: 16983980-16995855 Eucalyptus grandis
Eucgr.K01362 10.0kb downstream 10.0kb downstream 10000 false Chr11: 16985856-16995855 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040894 5273 Angiosperm View MSA
124067317 5270 Rosid View MSA
123739119 5271 Pentapetalae View MSA
122792428 5272 Eudicot View MSA
121345574 5274 Embryophyte View MSA
123424103 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 157.048 0.0 452.268 High  
cufflinks 22.785 0.0 57.4843    
cufflinks 76.4571 0.0 195.895 High  
cufflinks 2.7154 0.0 7.77023   Low
cufflinks 1.98062 0.0 6.05729   Low
cufflinks 665.286 0.0 2619.05 High High

0 Strain