Gene : Eucgr.K01335 E. grandis v2.0
Defline:  (1 of 1) PTHR12303:SF6 - UPF0586 PROTEIN C9ORF41 Genomic Order:  1120
Name:  ? Eucgr.K01335 Secondary Identifier:  ? PAC:32066924
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01335 0.5kb upstream 0.5kb upstream 11295 true Chr11: 16714235-16725529 Eucalyptus grandis
Eucgr.K01335 0.5kb upstream 0.5kb upstream 500 false Chr11: 16714235-16714734 Eucalyptus grandis
Eucgr.K01335 0.5kb downstream 0.5kb downstream 11295 true Chr11: 16714735-16726029 Eucalyptus grandis
Eucgr.K01335 0.5kb downstream 0.5kb downstream 500 false Chr11: 16725530-16726029 Eucalyptus grandis
Eucgr.K01335 1.0kb upstream 1.0kb upstream 11795 true Chr11: 16713735-16725529 Eucalyptus grandis
Eucgr.K01335 1.0kb upstream 1.0kb upstream 1000 false Chr11: 16713735-16714734 Eucalyptus grandis
Eucgr.K01335 1.0kb downstream 1.0kb downstream 11795 true Chr11: 16714735-16726529 Eucalyptus grandis
Eucgr.K01335 1.0kb downstream 1.0kb downstream 1000 false Chr11: 16725530-16726529 Eucalyptus grandis
Eucgr.K01335 2.0kb upstream 2.0kb upstream 12795 true Chr11: 16712735-16725529 Eucalyptus grandis
Eucgr.K01335 2.0kb upstream 2.0kb upstream 2000 false Chr11: 16712735-16714734 Eucalyptus grandis
Eucgr.K01335 2.0kb downstream 2.0kb downstream 12795 true Chr11: 16714735-16727529 Eucalyptus grandis
Eucgr.K01335 2.0kb downstream 2.0kb downstream 2000 false Chr11: 16725530-16727529 Eucalyptus grandis
Eucgr.K01335 5.0kb upstream 5.0kb upstream 15795 true Chr11: 16709735-16725529 Eucalyptus grandis
Eucgr.K01335 5.0kb upstream 5.0kb upstream 5000 false Chr11: 16709735-16714734 Eucalyptus grandis
Eucgr.K01335 5.0kb downstream 5.0kb downstream 15795 true Chr11: 16714735-16730529 Eucalyptus grandis
Eucgr.K01335 5.0kb downstream 5.0kb downstream 5000 false Chr11: 16725530-16730529 Eucalyptus grandis
Eucgr.K01335 10.0kb upstream 10.0kb upstream 20795 true Chr11: 16704735-16725529 Eucalyptus grandis
Eucgr.K01335 10.0kb upstream 10.0kb upstream 10000 false Chr11: 16704735-16714734 Eucalyptus grandis
Eucgr.K01335 10.0kb downstream 10.0kb downstream 20795 true Chr11: 16714735-16735529 Eucalyptus grandis
Eucgr.K01335 10.0kb downstream 10.0kb downstream 10000 false Chr11: 16725530-16735529 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060622 5270 Rosid View MSA
123739878 5271 Pentapetalae View MSA
122791925 5272 Eudicot View MSA
122046455 5273 Angiosperm View MSA
121344322 5274 Embryophyte View MSA
123425361 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.8636 0.0 96.253 High High
cufflinks 29.8928 0.0 67.6257    
cufflinks 33.6147 0.0 93.1188 High  
cufflinks 29.1788 0.0 82.3906    
cufflinks 32.0581 0.0 78.9301    
cufflinks 28.3193 0.0 63.5951   Low

0 Strain