Gene : Eucgr.K01276 E. grandis v2.0
Defline:  (1 of 3) PTHR33057:SF22 - OVATE FAMILY PROTEIN 1-RELATED Genomic Order:  1063
Name:  ? Eucgr.K01276 Secondary Identifier:  ? PAC:32066697
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01276 0.5kb upstream 0.5kb upstream 1869 true Chr11: 16248125-16249993 Eucalyptus grandis
Eucgr.K01276 0.5kb upstream 0.5kb upstream 500 false Chr11: 16248125-16248624 Eucalyptus grandis
Eucgr.K01276 0.5kb downstream 0.5kb downstream 1869 true Chr11: 16248625-16250493 Eucalyptus grandis
Eucgr.K01276 0.5kb downstream 0.5kb downstream 500 false Chr11: 16249994-16250493 Eucalyptus grandis
Eucgr.K01276 1.0kb upstream 1.0kb upstream 2369 true Chr11: 16247625-16249993 Eucalyptus grandis
Eucgr.K01276 1.0kb upstream 1.0kb upstream 1000 false Chr11: 16247625-16248624 Eucalyptus grandis
Eucgr.K01276 1.0kb downstream 1.0kb downstream 2369 true Chr11: 16248625-16250993 Eucalyptus grandis
Eucgr.K01276 1.0kb downstream 1.0kb downstream 1000 false Chr11: 16249994-16250993 Eucalyptus grandis
Eucgr.K01276 2.0kb upstream 2.0kb upstream 3369 true Chr11: 16246625-16249993 Eucalyptus grandis
Eucgr.K01276 2.0kb upstream 2.0kb upstream 2000 false Chr11: 16246625-16248624 Eucalyptus grandis
Eucgr.K01276 2.0kb downstream 2.0kb downstream 3369 true Chr11: 16248625-16251993 Eucalyptus grandis
Eucgr.K01276 2.0kb downstream 2.0kb downstream 2000 false Chr11: 16249994-16251993 Eucalyptus grandis
Eucgr.K01276 5.0kb upstream 5.0kb upstream 6369 true Chr11: 16243625-16249993 Eucalyptus grandis
Eucgr.K01276 5.0kb upstream 5.0kb upstream 5000 false Chr11: 16243625-16248624 Eucalyptus grandis
Eucgr.K01276 5.0kb downstream 5.0kb downstream 6369 true Chr11: 16248625-16254993 Eucalyptus grandis
Eucgr.K01276 5.0kb downstream 5.0kb downstream 5000 false Chr11: 16249994-16254993 Eucalyptus grandis
Eucgr.K01276 10.0kb upstream 10.0kb upstream 11369 true Chr11: 16238625-16249993 Eucalyptus grandis
Eucgr.K01276 10.0kb upstream 10.0kb upstream 10000 false Chr11: 16238625-16248624 Eucalyptus grandis
Eucgr.K01276 10.0kb downstream 10.0kb downstream 11369 true Chr11: 16248625-16259993 Eucalyptus grandis
Eucgr.K01276 10.0kb downstream 10.0kb downstream 10000 false Chr11: 16249994-16259993 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070169 5270 Rosid View MSA
123750394 5271 Pentapetalae View MSA
122789866 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.09488 0.0 8.39705    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.82114 0.0 5.2803    
cufflinks 0.496863 0.0 1.7061   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.6059 0.0 9.52075    

0 Strain