Gene : Eucgr.K01243 E. grandis v2.0
Defline:  (1 of 22) KOG0131 - Splicing factor 3b, subunit 4 Genomic Order:  1034
Name:  ? Eucgr.K01243 Secondary Identifier:  ? PAC:32067286
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01243 0.5kb upstream 0.5kb upstream 3311 true Chr11: 15872582-15875892 Eucalyptus grandis
Eucgr.K01243 0.5kb upstream 0.5kb upstream 500 false Chr11: 15875393-15875892 Eucalyptus grandis
Eucgr.K01243 0.5kb downstream 0.5kb downstream 3311 true Chr11: 15872082-15875392 Eucalyptus grandis
Eucgr.K01243 0.5kb downstream 0.5kb downstream 500 false Chr11: 15872082-15872581 Eucalyptus grandis
Eucgr.K01243 1.0kb upstream 1.0kb upstream 3811 true Chr11: 15872582-15876392 Eucalyptus grandis
Eucgr.K01243 1.0kb upstream 1.0kb upstream 1000 false Chr11: 15875393-15876392 Eucalyptus grandis
Eucgr.K01243 1.0kb downstream 1.0kb downstream 3811 true Chr11: 15871582-15875392 Eucalyptus grandis
Eucgr.K01243 1.0kb downstream 1.0kb downstream 1000 false Chr11: 15871582-15872581 Eucalyptus grandis
Eucgr.K01243 2.0kb upstream 2.0kb upstream 4811 true Chr11: 15872582-15877392 Eucalyptus grandis
Eucgr.K01243 2.0kb upstream 2.0kb upstream 2000 false Chr11: 15875393-15877392 Eucalyptus grandis
Eucgr.K01243 2.0kb downstream 2.0kb downstream 4811 true Chr11: 15870582-15875392 Eucalyptus grandis
Eucgr.K01243 2.0kb downstream 2.0kb downstream 2000 false Chr11: 15870582-15872581 Eucalyptus grandis
Eucgr.K01243 5.0kb upstream 5.0kb upstream 7811 true Chr11: 15872582-15880392 Eucalyptus grandis
Eucgr.K01243 5.0kb upstream 5.0kb upstream 5000 false Chr11: 15875393-15880392 Eucalyptus grandis
Eucgr.K01243 5.0kb downstream 5.0kb downstream 7811 true Chr11: 15867582-15875392 Eucalyptus grandis
Eucgr.K01243 5.0kb downstream 5.0kb downstream 5000 false Chr11: 15867582-15872581 Eucalyptus grandis
Eucgr.K01243 10.0kb upstream 10.0kb upstream 12811 true Chr11: 15872582-15885392 Eucalyptus grandis
Eucgr.K01243 10.0kb upstream 10.0kb upstream 10000 false Chr11: 15875393-15885392 Eucalyptus grandis
Eucgr.K01243 10.0kb downstream 10.0kb downstream 12811 true Chr11: 15862582-15875392 Eucalyptus grandis
Eucgr.K01243 10.0kb downstream 10.0kb downstream 10000 false Chr11: 15862582-15872581 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040882 5273 Angiosperm View MSA
124066117 5270 Rosid View MSA
123752208 5271 Pentapetalae View MSA
122797685 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 145.251 0.0 427.198 High  
cufflinks 14.7284 0.0 41.4187    
cufflinks 64.251 0.0 184.668 High  
cufflinks 7.91305 0.0 25.7463   Low
cufflinks 13.4637 0.0 33.8611    
cufflinks 347.957 0.0 1297.11 High High

0 Strain