Gene : Eucgr.K01223 E. grandis v2.0
Defline:  (1 of 1) PTHR11941:SF94 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 5 Genomic Order:  1016
Name:  ? Eucgr.K01223 Secondary Identifier:  ? PAC:32068067
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7574 Eucalyptus grandis pathologic  
Egrandis VALDEG-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01223 0.5kb upstream 0.5kb upstream 6492 true Chr11: 15675071-15681562 Eucalyptus grandis
Eucgr.K01223 0.5kb upstream 0.5kb upstream 500 false Chr11: 15681063-15681562 Eucalyptus grandis
Eucgr.K01223 0.5kb downstream 0.5kb downstream 6492 true Chr11: 15674571-15681062 Eucalyptus grandis
Eucgr.K01223 0.5kb downstream 0.5kb downstream 500 false Chr11: 15674571-15675070 Eucalyptus grandis
Eucgr.K01223 1.0kb upstream 1.0kb upstream 6992 true Chr11: 15675071-15682062 Eucalyptus grandis
Eucgr.K01223 1.0kb upstream 1.0kb upstream 1000 false Chr11: 15681063-15682062 Eucalyptus grandis
Eucgr.K01223 1.0kb downstream 1.0kb downstream 6992 true Chr11: 15674071-15681062 Eucalyptus grandis
Eucgr.K01223 1.0kb downstream 1.0kb downstream 1000 false Chr11: 15674071-15675070 Eucalyptus grandis
Eucgr.K01223 2.0kb upstream 2.0kb upstream 7992 true Chr11: 15675071-15683062 Eucalyptus grandis
Eucgr.K01223 2.0kb upstream 2.0kb upstream 2000 false Chr11: 15681063-15683062 Eucalyptus grandis
Eucgr.K01223 2.0kb downstream 2.0kb downstream 7992 true Chr11: 15673071-15681062 Eucalyptus grandis
Eucgr.K01223 2.0kb downstream 2.0kb downstream 2000 false Chr11: 15673071-15675070 Eucalyptus grandis
Eucgr.K01223 5.0kb upstream 5.0kb upstream 10992 true Chr11: 15675071-15686062 Eucalyptus grandis
Eucgr.K01223 5.0kb upstream 5.0kb upstream 5000 false Chr11: 15681063-15686062 Eucalyptus grandis
Eucgr.K01223 5.0kb downstream 5.0kb downstream 10992 true Chr11: 15670071-15681062 Eucalyptus grandis
Eucgr.K01223 5.0kb downstream 5.0kb downstream 5000 false Chr11: 15670071-15675070 Eucalyptus grandis
Eucgr.K01223 10.0kb upstream 10.0kb upstream 15992 true Chr11: 15675071-15691062 Eucalyptus grandis
Eucgr.K01223 10.0kb upstream 10.0kb upstream 10000 false Chr11: 15681063-15691062 Eucalyptus grandis
Eucgr.K01223 10.0kb downstream 10.0kb downstream 15992 true Chr11: 15665071-15681062 Eucalyptus grandis
Eucgr.K01223 10.0kb downstream 10.0kb downstream 10000 false Chr11: 15665071-15675070 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061384 5270 Rosid View MSA
123736609 5271 Pentapetalae View MSA
122789369 5272 Eudicot View MSA
122044821 5273 Angiosperm View MSA
121345696 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.69093 0.0 17.4618    
cufflinks 180.926 0.0 635.108 High High
cufflinks 11.2656 0.0 29.3465    
cufflinks 102.985 0.0 319.307 High High
cufflinks 16.1674 0.0 40.5837    
cufflinks 11.9416 0.0 30.8174    

0 Strain