Gene : Eucgr.K01222 E. grandis v2.0
Defline:  (1 of 2) PTHR31479:SF3 - GB Genomic Order:  1015
Name:  ? Eucgr.K01222 Secondary Identifier:  ? PAC:32067261
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01222 0.5kb upstream 0.5kb upstream 2414 true Chr11: 15672507-15674920 Eucalyptus grandis
Eucgr.K01222 0.5kb upstream 0.5kb upstream 500 false Chr11: 15674421-15674920 Eucalyptus grandis
Eucgr.K01222 0.5kb downstream 0.5kb downstream 2414 true Chr11: 15672007-15674420 Eucalyptus grandis
Eucgr.K01222 0.5kb downstream 0.5kb downstream 500 false Chr11: 15672007-15672506 Eucalyptus grandis
Eucgr.K01222 1.0kb upstream 1.0kb upstream 2914 true Chr11: 15672507-15675420 Eucalyptus grandis
Eucgr.K01222 1.0kb upstream 1.0kb upstream 1000 false Chr11: 15674421-15675420 Eucalyptus grandis
Eucgr.K01222 1.0kb downstream 1.0kb downstream 2914 true Chr11: 15671507-15674420 Eucalyptus grandis
Eucgr.K01222 1.0kb downstream 1.0kb downstream 1000 false Chr11: 15671507-15672506 Eucalyptus grandis
Eucgr.K01222 2.0kb upstream 2.0kb upstream 3914 true Chr11: 15672507-15676420 Eucalyptus grandis
Eucgr.K01222 2.0kb upstream 2.0kb upstream 2000 false Chr11: 15674421-15676420 Eucalyptus grandis
Eucgr.K01222 2.0kb downstream 2.0kb downstream 3914 true Chr11: 15670507-15674420 Eucalyptus grandis
Eucgr.K01222 2.0kb downstream 2.0kb downstream 2000 false Chr11: 15670507-15672506 Eucalyptus grandis
Eucgr.K01222 5.0kb upstream 5.0kb upstream 6914 true Chr11: 15672507-15679420 Eucalyptus grandis
Eucgr.K01222 5.0kb upstream 5.0kb upstream 5000 false Chr11: 15674421-15679420 Eucalyptus grandis
Eucgr.K01222 5.0kb downstream 5.0kb downstream 6914 true Chr11: 15667507-15674420 Eucalyptus grandis
Eucgr.K01222 5.0kb downstream 5.0kb downstream 5000 false Chr11: 15667507-15672506 Eucalyptus grandis
Eucgr.K01222 10.0kb upstream 10.0kb upstream 11914 true Chr11: 15672507-15684420 Eucalyptus grandis
Eucgr.K01222 10.0kb upstream 10.0kb upstream 10000 false Chr11: 15674421-15684420 Eucalyptus grandis
Eucgr.K01222 10.0kb downstream 10.0kb downstream 11914 true Chr11: 15662507-15674420 Eucalyptus grandis
Eucgr.K01222 10.0kb downstream 10.0kb downstream 10000 false Chr11: 15662507-15672506 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064820 5270 Rosid View MSA
123751419 5271 Pentapetalae View MSA
122793765 5272 Eudicot View MSA
122045086 5273 Angiosperm View MSA
121351664 5274 Embryophyte View MSA
123382268 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.06379 0.0 18.7004   High
cufflinks 0.370099 0.0 1.19152 Low Low
cufflinks 3.12907 0.0 7.97556    
cufflinks 0.795061 0.0 2.33271    
cufflinks 2.25665 0.0 5.9469    
cufflinks 2.73295 0.0 7.0163    

0 Strain