Gene : Eucgr.K01214 E. grandis v2.0
Defline:  (1 of 18) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  1008
Name:  ? Eucgr.K01214 Secondary Identifier:  ? PAC:32066873
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01214 0.5kb upstream 0.5kb upstream 1282 true Chr11: 15543439-15544720 Eucalyptus grandis
Eucgr.K01214 0.5kb upstream 0.5kb upstream 500 false Chr11: 15544221-15544720 Eucalyptus grandis
Eucgr.K01214 0.5kb downstream 0.5kb downstream 1282 true Chr11: 15542939-15544220 Eucalyptus grandis
Eucgr.K01214 0.5kb downstream 0.5kb downstream 500 false Chr11: 15542939-15543438 Eucalyptus grandis
Eucgr.K01214 1.0kb upstream 1.0kb upstream 1782 true Chr11: 15543439-15545220 Eucalyptus grandis
Eucgr.K01214 1.0kb upstream 1.0kb upstream 1000 false Chr11: 15544221-15545220 Eucalyptus grandis
Eucgr.K01214 1.0kb downstream 1.0kb downstream 1782 true Chr11: 15542439-15544220 Eucalyptus grandis
Eucgr.K01214 1.0kb downstream 1.0kb downstream 1000 false Chr11: 15542439-15543438 Eucalyptus grandis
Eucgr.K01214 2.0kb upstream 2.0kb upstream 2782 true Chr11: 15543439-15546220 Eucalyptus grandis
Eucgr.K01214 2.0kb upstream 2.0kb upstream 2000 false Chr11: 15544221-15546220 Eucalyptus grandis
Eucgr.K01214 2.0kb downstream 2.0kb downstream 2782 true Chr11: 15541439-15544220 Eucalyptus grandis
Eucgr.K01214 2.0kb downstream 2.0kb downstream 2000 false Chr11: 15541439-15543438 Eucalyptus grandis
Eucgr.K01214 5.0kb upstream 5.0kb upstream 5782 true Chr11: 15543439-15549220 Eucalyptus grandis
Eucgr.K01214 5.0kb upstream 5.0kb upstream 5000 false Chr11: 15544221-15549220 Eucalyptus grandis
Eucgr.K01214 5.0kb downstream 5.0kb downstream 5782 true Chr11: 15538439-15544220 Eucalyptus grandis
Eucgr.K01214 5.0kb downstream 5.0kb downstream 5000 false Chr11: 15538439-15543438 Eucalyptus grandis
Eucgr.K01214 10.0kb upstream 10.0kb upstream 10782 true Chr11: 15543439-15554220 Eucalyptus grandis
Eucgr.K01214 10.0kb upstream 10.0kb upstream 10000 false Chr11: 15544221-15554220 Eucalyptus grandis
Eucgr.K01214 10.0kb downstream 10.0kb downstream 10782 true Chr11: 15533439-15544220 Eucalyptus grandis
Eucgr.K01214 10.0kb downstream 10.0kb downstream 10000 false Chr11: 15533439-15543438 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065171 5270 Rosid View MSA
123741196 5271 Pentapetalae View MSA
122795014 5272 Eudicot View MSA
122048300 5273 Angiosperm View MSA
121310921 5274 Embryophyte View MSA
123348293 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.369116 0.0 1.39073 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain