Gene : Eucgr.K01189 E. grandis v2.0
Defline:  (1 of 1) PTHR10709 - ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1 Genomic Order:  989
Name:  ? Eucgr.K01189 Secondary Identifier:  ? PAC:32068378
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01189 0.5kb upstream 0.5kb upstream 9480 true Chr11: 15340492-15349971 Eucalyptus grandis
Eucgr.K01189 0.5kb upstream 0.5kb upstream 500 false Chr11: 15340492-15340991 Eucalyptus grandis
Eucgr.K01189 0.5kb downstream 0.5kb downstream 9480 true Chr11: 15340992-15350471 Eucalyptus grandis
Eucgr.K01189 0.5kb downstream 0.5kb downstream 500 false Chr11: 15349972-15350471 Eucalyptus grandis
Eucgr.K01189 1.0kb upstream 1.0kb upstream 9980 true Chr11: 15339992-15349971 Eucalyptus grandis
Eucgr.K01189 1.0kb upstream 1.0kb upstream 1000 false Chr11: 15339992-15340991 Eucalyptus grandis
Eucgr.K01189 1.0kb downstream 1.0kb downstream 9980 true Chr11: 15340992-15350971 Eucalyptus grandis
Eucgr.K01189 1.0kb downstream 1.0kb downstream 1000 false Chr11: 15349972-15350971 Eucalyptus grandis
Eucgr.K01189 2.0kb upstream 2.0kb upstream 10980 true Chr11: 15338992-15349971 Eucalyptus grandis
Eucgr.K01189 2.0kb upstream 2.0kb upstream 2000 false Chr11: 15338992-15340991 Eucalyptus grandis
Eucgr.K01189 2.0kb downstream 2.0kb downstream 10980 true Chr11: 15340992-15351971 Eucalyptus grandis
Eucgr.K01189 2.0kb downstream 2.0kb downstream 2000 false Chr11: 15349972-15351971 Eucalyptus grandis
Eucgr.K01189 5.0kb upstream 5.0kb upstream 13980 true Chr11: 15335992-15349971 Eucalyptus grandis
Eucgr.K01189 5.0kb upstream 5.0kb upstream 5000 false Chr11: 15335992-15340991 Eucalyptus grandis
Eucgr.K01189 5.0kb downstream 5.0kb downstream 13980 true Chr11: 15340992-15354971 Eucalyptus grandis
Eucgr.K01189 5.0kb downstream 5.0kb downstream 5000 false Chr11: 15349972-15354971 Eucalyptus grandis
Eucgr.K01189 10.0kb upstream 10.0kb upstream 18980 true Chr11: 15330992-15349971 Eucalyptus grandis
Eucgr.K01189 10.0kb upstream 10.0kb upstream 10000 false Chr11: 15330992-15340991 Eucalyptus grandis
Eucgr.K01189 10.0kb downstream 10.0kb downstream 18980 true Chr11: 15340992-15359971 Eucalyptus grandis
Eucgr.K01189 10.0kb downstream 10.0kb downstream 10000 false Chr11: 15349972-15359971 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063106 5270 Rosid View MSA
123746125 5271 Pentapetalae View MSA
122786380 5272 Eudicot View MSA
122051463 5273 Angiosperm View MSA
121344738 5274 Embryophyte View MSA
123424487 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.1979 0.0 39.4217    
cufflinks 29.0644 0.0 65.3847    
cufflinks 14.6876 0.0 33.8939   Low
cufflinks 43.7233 0.0 100.742 High High
cufflinks 24.4278 0.0 54.8263    
cufflinks 18.1654 0.0 41.3788    

0 Strain