Gene : Eucgr.K01200 E. grandis v2.0
Defline:  (1 of 1) PTHR19288:SF25 - PHOSPHATIDYLGLYCEROPHOSPHATASE GEP4, MITOCHONDRIAL Genomic Order:  1000
Name:  ? Eucgr.K01200 Secondary Identifier:  ? PAC:32066141
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY4FS-7 Eucalyptus grandis pathologic  
Egrandis PWY-5269 Eucalyptus grandis pathologic  
Egrandis PWY-7204 Eucalyptus grandis pathologic  
Egrandis SER-GLYSYN-PWY Eucalyptus grandis pathologic  
Egrandis SERSYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01200 0.5kb upstream 0.5kb upstream 4514 true Chr11: 15447157-15451670 Eucalyptus grandis
Eucgr.K01200 0.5kb upstream 0.5kb upstream 500 false Chr11: 15451171-15451670 Eucalyptus grandis
Eucgr.K01200 0.5kb downstream 0.5kb downstream 4514 true Chr11: 15446657-15451170 Eucalyptus grandis
Eucgr.K01200 0.5kb downstream 0.5kb downstream 500 false Chr11: 15446657-15447156 Eucalyptus grandis
Eucgr.K01200 1.0kb upstream 1.0kb upstream 5014 true Chr11: 15447157-15452170 Eucalyptus grandis
Eucgr.K01200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 15451171-15452170 Eucalyptus grandis
Eucgr.K01200 1.0kb downstream 1.0kb downstream 5014 true Chr11: 15446157-15451170 Eucalyptus grandis
Eucgr.K01200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 15446157-15447156 Eucalyptus grandis
Eucgr.K01200 2.0kb upstream 2.0kb upstream 6014 true Chr11: 15447157-15453170 Eucalyptus grandis
Eucgr.K01200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 15451171-15453170 Eucalyptus grandis
Eucgr.K01200 2.0kb downstream 2.0kb downstream 6014 true Chr11: 15445157-15451170 Eucalyptus grandis
Eucgr.K01200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 15445157-15447156 Eucalyptus grandis
Eucgr.K01200 5.0kb upstream 5.0kb upstream 9014 true Chr11: 15447157-15456170 Eucalyptus grandis
Eucgr.K01200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 15451171-15456170 Eucalyptus grandis
Eucgr.K01200 5.0kb downstream 5.0kb downstream 9014 true Chr11: 15442157-15451170 Eucalyptus grandis
Eucgr.K01200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 15442157-15447156 Eucalyptus grandis
Eucgr.K01200 10.0kb upstream 10.0kb upstream 14014 true Chr11: 15447157-15461170 Eucalyptus grandis
Eucgr.K01200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 15451171-15461170 Eucalyptus grandis
Eucgr.K01200 10.0kb downstream 10.0kb downstream 14014 true Chr11: 15437157-15451170 Eucalyptus grandis
Eucgr.K01200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 15437157-15447156 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061153 5270 Rosid View MSA
123744955 5271 Pentapetalae View MSA
122787883 5272 Eudicot View MSA
122047314 5273 Angiosperm View MSA
121345007 5274 Embryophyte View MSA
123425553 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.72311 0.0 22.8503    
cufflinks 4.59619 0.0 12.3563   Low
cufflinks 6.83794 0.0 16.8927    
cufflinks 5.76375 0.0 14.5369    
cufflinks 8.92935 0.0 21.1935    
cufflinks 13.367 0.0 32.219   High

0 Strain