Gene : Eucgr.K01198 E. grandis v2.0
Defline:  (1 of 2) PTHR33210:SF6 - PROTODERMAL FACTOR 1 Genomic Order:  998
Name:  ? Eucgr.K01198 Secondary Identifier:  ? PAC:32068693
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01198 0.5kb upstream 0.5kb upstream 2395 true Chr11: 15438213-15440607 Eucalyptus grandis
Eucgr.K01198 0.5kb upstream 0.5kb upstream 500 false Chr11: 15440108-15440607 Eucalyptus grandis
Eucgr.K01198 0.5kb downstream 0.5kb downstream 2395 true Chr11: 15437713-15440107 Eucalyptus grandis
Eucgr.K01198 0.5kb downstream 0.5kb downstream 500 false Chr11: 15437713-15438212 Eucalyptus grandis
Eucgr.K01198 1.0kb upstream 1.0kb upstream 2895 true Chr11: 15438213-15441107 Eucalyptus grandis
Eucgr.K01198 1.0kb upstream 1.0kb upstream 1000 false Chr11: 15440108-15441107 Eucalyptus grandis
Eucgr.K01198 1.0kb downstream 1.0kb downstream 2895 true Chr11: 15437213-15440107 Eucalyptus grandis
Eucgr.K01198 1.0kb downstream 1.0kb downstream 1000 false Chr11: 15437213-15438212 Eucalyptus grandis
Eucgr.K01198 2.0kb upstream 2.0kb upstream 3895 true Chr11: 15438213-15442107 Eucalyptus grandis
Eucgr.K01198 2.0kb upstream 2.0kb upstream 2000 false Chr11: 15440108-15442107 Eucalyptus grandis
Eucgr.K01198 2.0kb downstream 2.0kb downstream 3895 true Chr11: 15436213-15440107 Eucalyptus grandis
Eucgr.K01198 2.0kb downstream 2.0kb downstream 2000 false Chr11: 15436213-15438212 Eucalyptus grandis
Eucgr.K01198 5.0kb upstream 5.0kb upstream 6895 true Chr11: 15438213-15445107 Eucalyptus grandis
Eucgr.K01198 5.0kb upstream 5.0kb upstream 5000 false Chr11: 15440108-15445107 Eucalyptus grandis
Eucgr.K01198 5.0kb downstream 5.0kb downstream 6895 true Chr11: 15433213-15440107 Eucalyptus grandis
Eucgr.K01198 5.0kb downstream 5.0kb downstream 5000 false Chr11: 15433213-15438212 Eucalyptus grandis
Eucgr.K01198 10.0kb upstream 10.0kb upstream 11895 true Chr11: 15438213-15450107 Eucalyptus grandis
Eucgr.K01198 10.0kb upstream 10.0kb upstream 10000 false Chr11: 15440108-15450107 Eucalyptus grandis
Eucgr.K01198 10.0kb downstream 10.0kb downstream 11895 true Chr11: 15428213-15440107 Eucalyptus grandis
Eucgr.K01198 10.0kb downstream 10.0kb downstream 10000 false Chr11: 15428213-15438212 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068625 5270 Rosid View MSA
123747098 5271 Pentapetalae View MSA
122793338 5272 Eudicot View MSA
122042133 5273 Angiosperm View MSA
121349082 5274 Embryophyte View MSA
123381156 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.16012 0.0 0.598731 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.72644 0.0 7.31442    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain