Gene : Eucgr.K01105 E. grandis v2.0
Defline:  (1 of 1) 1.1.1.86 - Ketol-acid reductoisomerase (NADP(+)) / Dihydroxyisovalerate dehydrogenase (isomerizing) Genomic Order:  927
Name:  ? Eucgr.K01105 Secondary Identifier:  ? PAC:32068499
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis BRANCHED-CHAIN-AA-SYN-PWY Eucalyptus grandis pathologic  
Egrandis ILEUSYN-PWY Eucalyptus grandis pathologic  
Egrandis PWY-3001 Eucalyptus grandis pathologic  
Egrandis VALSYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01105 0.5kb upstream 0.5kb upstream 4924 true Chr11: 14144086-14149009 Eucalyptus grandis
Eucgr.K01105 0.5kb upstream 0.5kb upstream 500 false Chr11: 14144086-14144585 Eucalyptus grandis
Eucgr.K01105 0.5kb downstream 0.5kb downstream 4924 true Chr11: 14144586-14149509 Eucalyptus grandis
Eucgr.K01105 0.5kb downstream 0.5kb downstream 500 false Chr11: 14149010-14149509 Eucalyptus grandis
Eucgr.K01105 1.0kb upstream 1.0kb upstream 5424 true Chr11: 14143586-14149009 Eucalyptus grandis
Eucgr.K01105 1.0kb upstream 1.0kb upstream 1000 false Chr11: 14143586-14144585 Eucalyptus grandis
Eucgr.K01105 1.0kb downstream 1.0kb downstream 5424 true Chr11: 14144586-14150009 Eucalyptus grandis
Eucgr.K01105 1.0kb downstream 1.0kb downstream 1000 false Chr11: 14149010-14150009 Eucalyptus grandis
Eucgr.K01105 2.0kb upstream 2.0kb upstream 6424 true Chr11: 14142586-14149009 Eucalyptus grandis
Eucgr.K01105 2.0kb upstream 2.0kb upstream 2000 false Chr11: 14142586-14144585 Eucalyptus grandis
Eucgr.K01105 2.0kb downstream 2.0kb downstream 6424 true Chr11: 14144586-14151009 Eucalyptus grandis
Eucgr.K01105 2.0kb downstream 2.0kb downstream 2000 false Chr11: 14149010-14151009 Eucalyptus grandis
Eucgr.K01105 5.0kb upstream 5.0kb upstream 9424 true Chr11: 14139586-14149009 Eucalyptus grandis
Eucgr.K01105 5.0kb upstream 5.0kb upstream 5000 false Chr11: 14139586-14144585 Eucalyptus grandis
Eucgr.K01105 5.0kb downstream 5.0kb downstream 9424 true Chr11: 14144586-14154009 Eucalyptus grandis
Eucgr.K01105 5.0kb downstream 5.0kb downstream 5000 false Chr11: 14149010-14154009 Eucalyptus grandis
Eucgr.K01105 10.0kb upstream 10.0kb upstream 14424 true Chr11: 14134586-14149009 Eucalyptus grandis
Eucgr.K01105 10.0kb upstream 10.0kb upstream 10000 false Chr11: 14134586-14144585 Eucalyptus grandis
Eucgr.K01105 10.0kb downstream 10.0kb downstream 14424 true Chr11: 14144586-14159009 Eucalyptus grandis
Eucgr.K01105 10.0kb downstream 10.0kb downstream 10000 false Chr11: 14149010-14159009 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060504 5270 Rosid View MSA
123749649 5271 Pentapetalae View MSA
122794973 5272 Eudicot View MSA
122043531 5273 Angiosperm View MSA
121344443 5274 Embryophyte View MSA
123428276 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.8046 0.0 48.9877   Low
cufflinks 108.667 0.0 320.715 High High
cufflinks 75.8477 0.0 206.695 High  
cufflinks 24.9356 0.0 56.3642   Low
cufflinks 39.879 0.0 94.1641 High  
cufflinks 68.8491 0.0 157.358 High  

0 Strain