Gene : Eucgr.K01037 E. grandis v2.0
Defline:  (1 of 3) PTHR13935:SF53 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  869
Name:  ? Eucgr.K01037 Secondary Identifier:  ? PAC:32068294
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01037 0.5kb upstream 0.5kb upstream 1888 true Chr11: 13309651-13311538 Eucalyptus grandis
Eucgr.K01037 0.5kb upstream 0.5kb upstream 500 false Chr11: 13311039-13311538 Eucalyptus grandis
Eucgr.K01037 0.5kb downstream 0.5kb downstream 1888 true Chr11: 13309151-13311038 Eucalyptus grandis
Eucgr.K01037 0.5kb downstream 0.5kb downstream 500 false Chr11: 13309151-13309650 Eucalyptus grandis
Eucgr.K01037 1.0kb upstream 1.0kb upstream 2388 true Chr11: 13309651-13312038 Eucalyptus grandis
Eucgr.K01037 1.0kb upstream 1.0kb upstream 1000 false Chr11: 13311039-13312038 Eucalyptus grandis
Eucgr.K01037 1.0kb downstream 1.0kb downstream 2388 true Chr11: 13308651-13311038 Eucalyptus grandis
Eucgr.K01037 1.0kb downstream 1.0kb downstream 1000 false Chr11: 13308651-13309650 Eucalyptus grandis
Eucgr.K01037 2.0kb upstream 2.0kb upstream 3388 true Chr11: 13309651-13313038 Eucalyptus grandis
Eucgr.K01037 2.0kb upstream 2.0kb upstream 2000 false Chr11: 13311039-13313038 Eucalyptus grandis
Eucgr.K01037 2.0kb downstream 2.0kb downstream 3388 true Chr11: 13307651-13311038 Eucalyptus grandis
Eucgr.K01037 2.0kb downstream 2.0kb downstream 2000 false Chr11: 13307651-13309650 Eucalyptus grandis
Eucgr.K01037 5.0kb upstream 5.0kb upstream 6388 true Chr11: 13309651-13316038 Eucalyptus grandis
Eucgr.K01037 5.0kb upstream 5.0kb upstream 5000 false Chr11: 13311039-13316038 Eucalyptus grandis
Eucgr.K01037 5.0kb downstream 5.0kb downstream 6388 true Chr11: 13304651-13311038 Eucalyptus grandis
Eucgr.K01037 5.0kb downstream 5.0kb downstream 5000 false Chr11: 13304651-13309650 Eucalyptus grandis
Eucgr.K01037 10.0kb upstream 10.0kb upstream 11388 true Chr11: 13309651-13321038 Eucalyptus grandis
Eucgr.K01037 10.0kb upstream 10.0kb upstream 10000 false Chr11: 13311039-13321038 Eucalyptus grandis
Eucgr.K01037 10.0kb downstream 10.0kb downstream 11388 true Chr11: 13299651-13311038 Eucalyptus grandis
Eucgr.K01037 10.0kb downstream 10.0kb downstream 10000 false Chr11: 13299651-13309650 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
124070825 5270 Rosid View MSA
123745471 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.353968 0.0 1.32358 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.172071 0.0 0.779196 Low Low
cufflinks 0.330189 0.0 1.24406 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain