Gene : Eucgr.K01039 E. grandis v2.0
Defline:  (1 of 3) PTHR13935:SF53 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  871
Name:  ? Eucgr.K01039 Secondary Identifier:  ? PAC:32066513
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01039 0.5kb upstream 0.5kb upstream 2088 true Chr11: 13411313-13413400 Eucalyptus grandis
Eucgr.K01039 0.5kb upstream 0.5kb upstream 500 false Chr11: 13412901-13413400 Eucalyptus grandis
Eucgr.K01039 0.5kb downstream 0.5kb downstream 2088 true Chr11: 13410813-13412900 Eucalyptus grandis
Eucgr.K01039 0.5kb downstream 0.5kb downstream 500 false Chr11: 13410813-13411312 Eucalyptus grandis
Eucgr.K01039 1.0kb upstream 1.0kb upstream 2588 true Chr11: 13411313-13413900 Eucalyptus grandis
Eucgr.K01039 1.0kb upstream 1.0kb upstream 1000 false Chr11: 13412901-13413900 Eucalyptus grandis
Eucgr.K01039 1.0kb downstream 1.0kb downstream 2588 true Chr11: 13410313-13412900 Eucalyptus grandis
Eucgr.K01039 1.0kb downstream 1.0kb downstream 1000 false Chr11: 13410313-13411312 Eucalyptus grandis
Eucgr.K01039 2.0kb upstream 2.0kb upstream 3588 true Chr11: 13411313-13414900 Eucalyptus grandis
Eucgr.K01039 2.0kb upstream 2.0kb upstream 2000 false Chr11: 13412901-13414900 Eucalyptus grandis
Eucgr.K01039 2.0kb downstream 2.0kb downstream 3588 true Chr11: 13409313-13412900 Eucalyptus grandis
Eucgr.K01039 2.0kb downstream 2.0kb downstream 2000 false Chr11: 13409313-13411312 Eucalyptus grandis
Eucgr.K01039 5.0kb upstream 5.0kb upstream 6588 true Chr11: 13411313-13417900 Eucalyptus grandis
Eucgr.K01039 5.0kb upstream 5.0kb upstream 5000 false Chr11: 13412901-13417900 Eucalyptus grandis
Eucgr.K01039 5.0kb downstream 5.0kb downstream 6588 true Chr11: 13406313-13412900 Eucalyptus grandis
Eucgr.K01039 5.0kb downstream 5.0kb downstream 5000 false Chr11: 13406313-13411312 Eucalyptus grandis
Eucgr.K01039 10.0kb upstream 10.0kb upstream 11588 true Chr11: 13411313-13422900 Eucalyptus grandis
Eucgr.K01039 10.0kb upstream 10.0kb upstream 10000 false Chr11: 13412901-13422900 Eucalyptus grandis
Eucgr.K01039 10.0kb downstream 10.0kb downstream 11588 true Chr11: 13401313-13412900 Eucalyptus grandis
Eucgr.K01039 10.0kb downstream 10.0kb downstream 10000 false Chr11: 13401313-13411312 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
124070825 5270 Rosid View MSA
123745471 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.2082 0.0 71.9411 High  
cufflinks 7.21884 0.0 18.1324    
cufflinks 25.8805 0.0 58.3589 High  
cufflinks 23.443 0.0 53.1456    
cufflinks 0.990997 0.0 3.06521   Low
cufflinks 28.6624 0.0 64.3707    

0 Strain