Gene : Eucgr.K01017 E. grandis v2.0
Defline:  (1 of 1) PTHR21098 - RIBOFLAVIN SYNTHASE ALPHA CHAIN Genomic Order:  854
Name:  ? Eucgr.K01017 Secondary Identifier:  ? PAC:32069231
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis RIBOSYN2-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01017 0.5kb upstream 0.5kb upstream 5066 true Chr11: 12943821-12948886 Eucalyptus grandis
Eucgr.K01017 0.5kb upstream 0.5kb upstream 500 false Chr11: 12948387-12948886 Eucalyptus grandis
Eucgr.K01017 0.5kb downstream 0.5kb downstream 5066 true Chr11: 12943321-12948386 Eucalyptus grandis
Eucgr.K01017 0.5kb downstream 0.5kb downstream 500 false Chr11: 12943321-12943820 Eucalyptus grandis
Eucgr.K01017 1.0kb upstream 1.0kb upstream 5566 true Chr11: 12943821-12949386 Eucalyptus grandis
Eucgr.K01017 1.0kb upstream 1.0kb upstream 1000 false Chr11: 12948387-12949386 Eucalyptus grandis
Eucgr.K01017 1.0kb downstream 1.0kb downstream 5566 true Chr11: 12942821-12948386 Eucalyptus grandis
Eucgr.K01017 1.0kb downstream 1.0kb downstream 1000 false Chr11: 12942821-12943820 Eucalyptus grandis
Eucgr.K01017 2.0kb upstream 2.0kb upstream 6566 true Chr11: 12943821-12950386 Eucalyptus grandis
Eucgr.K01017 2.0kb upstream 2.0kb upstream 2000 false Chr11: 12948387-12950386 Eucalyptus grandis
Eucgr.K01017 2.0kb downstream 2.0kb downstream 6566 true Chr11: 12941821-12948386 Eucalyptus grandis
Eucgr.K01017 2.0kb downstream 2.0kb downstream 2000 false Chr11: 12941821-12943820 Eucalyptus grandis
Eucgr.K01017 5.0kb upstream 5.0kb upstream 9566 true Chr11: 12943821-12953386 Eucalyptus grandis
Eucgr.K01017 5.0kb upstream 5.0kb upstream 5000 false Chr11: 12948387-12953386 Eucalyptus grandis
Eucgr.K01017 5.0kb downstream 5.0kb downstream 9566 true Chr11: 12938821-12948386 Eucalyptus grandis
Eucgr.K01017 5.0kb downstream 5.0kb downstream 5000 false Chr11: 12938821-12943820 Eucalyptus grandis
Eucgr.K01017 10.0kb upstream 10.0kb upstream 14566 true Chr11: 12943821-12958386 Eucalyptus grandis
Eucgr.K01017 10.0kb upstream 10.0kb upstream 10000 false Chr11: 12948387-12958386 Eucalyptus grandis
Eucgr.K01017 10.0kb downstream 10.0kb downstream 14566 true Chr11: 12933821-12948386 Eucalyptus grandis
Eucgr.K01017 10.0kb downstream 10.0kb downstream 10000 false Chr11: 12933821-12943820 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067605 5270 Rosid View MSA
123749559 5271 Pentapetalae View MSA
122790279 5272 Eudicot View MSA
122043158 5273 Angiosperm View MSA
121344512 5274 Embryophyte View MSA
123423798 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.9483 0.0 55.5682    
cufflinks 9.12747 0.0 21.643    
cufflinks 15.3774 0.0 40.9901    
cufflinks 9.95393 0.0 23.4041    
cufflinks 5.76407 0.0 14.5903   Low
cufflinks 24.2385 0.0 65.8553   High

0 Strain