Gene : Eucgr.K01855 E. grandis v2.0
Defline:  (1 of 1) PTHR12897 - COLON CANCER-ASSOCIATED PROTEIN MIC1 Genomic Order:  1561
Name:  ? Eucgr.K01855 Secondary Identifier:  ? PAC:32066613
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01855 0.5kb upstream 0.5kb upstream 9323 true Chr11: 24376718-24386040 Eucalyptus grandis
Eucgr.K01855 0.5kb upstream 0.5kb upstream 500 false Chr11: 24385541-24386040 Eucalyptus grandis
Eucgr.K01855 0.5kb downstream 0.5kb downstream 9323 true Chr11: 24376218-24385540 Eucalyptus grandis
Eucgr.K01855 0.5kb downstream 0.5kb downstream 500 false Chr11: 24376218-24376717 Eucalyptus grandis
Eucgr.K01855 1.0kb upstream 1.0kb upstream 9823 true Chr11: 24376718-24386540 Eucalyptus grandis
Eucgr.K01855 1.0kb upstream 1.0kb upstream 1000 false Chr11: 24385541-24386540 Eucalyptus grandis
Eucgr.K01855 1.0kb downstream 1.0kb downstream 9823 true Chr11: 24375718-24385540 Eucalyptus grandis
Eucgr.K01855 1.0kb downstream 1.0kb downstream 1000 false Chr11: 24375718-24376717 Eucalyptus grandis
Eucgr.K01855 2.0kb upstream 2.0kb upstream 10823 true Chr11: 24376718-24387540 Eucalyptus grandis
Eucgr.K01855 2.0kb upstream 2.0kb upstream 2000 false Chr11: 24385541-24387540 Eucalyptus grandis
Eucgr.K01855 2.0kb downstream 2.0kb downstream 10823 true Chr11: 24374718-24385540 Eucalyptus grandis
Eucgr.K01855 2.0kb downstream 2.0kb downstream 2000 false Chr11: 24374718-24376717 Eucalyptus grandis
Eucgr.K01855 5.0kb upstream 5.0kb upstream 13823 true Chr11: 24376718-24390540 Eucalyptus grandis
Eucgr.K01855 5.0kb upstream 5.0kb upstream 5000 false Chr11: 24385541-24390540 Eucalyptus grandis
Eucgr.K01855 5.0kb downstream 5.0kb downstream 13823 true Chr11: 24371718-24385540 Eucalyptus grandis
Eucgr.K01855 5.0kb downstream 5.0kb downstream 5000 false Chr11: 24371718-24376717 Eucalyptus grandis
Eucgr.K01855 10.0kb upstream 10.0kb upstream 18823 true Chr11: 24376718-24395540 Eucalyptus grandis
Eucgr.K01855 10.0kb upstream 10.0kb upstream 10000 false Chr11: 24385541-24395540 Eucalyptus grandis
Eucgr.K01855 10.0kb downstream 10.0kb downstream 18823 true Chr11: 24366718-24385540 Eucalyptus grandis
Eucgr.K01855 10.0kb downstream 10.0kb downstream 10000 false Chr11: 24366718-24376717 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069294 5270 Rosid View MSA
123740632 5271 Pentapetalae View MSA
122785663 5272 Eudicot View MSA
122048416 5273 Angiosperm View MSA
121348965 5274 Embryophyte View MSA
123424129 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.8531 0.0 31.4736    
cufflinks 19.4529 0.0 43.7978   High
cufflinks 10.9212 0.0 25.143    
cufflinks 13.3814 0.0 30.125    
cufflinks 6.00715 0.0 14.0745   Low
cufflinks 15.0303 0.0 34.2547    

0 Strain