Gene : Eucgr.K01858 E. grandis v2.0
Defline:  (1 of 2) PF07333 - S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) (SLR1-BP) Genomic Order:  1564
Name:  ? Eucgr.K01858 Secondary Identifier:  ? PAC:32069269
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01858 0.5kb upstream 0.5kb upstream 1941 true Chr11: 24391445-24393385 Eucalyptus grandis
Eucgr.K01858 0.5kb upstream 0.5kb upstream 500 false Chr11: 24391445-24391944 Eucalyptus grandis
Eucgr.K01858 0.5kb downstream 0.5kb downstream 1941 true Chr11: 24391945-24393885 Eucalyptus grandis
Eucgr.K01858 0.5kb downstream 0.5kb downstream 500 false Chr11: 24393386-24393885 Eucalyptus grandis
Eucgr.K01858 1.0kb upstream 1.0kb upstream 2441 true Chr11: 24390945-24393385 Eucalyptus grandis
Eucgr.K01858 1.0kb upstream 1.0kb upstream 1000 false Chr11: 24390945-24391944 Eucalyptus grandis
Eucgr.K01858 1.0kb downstream 1.0kb downstream 2441 true Chr11: 24391945-24394385 Eucalyptus grandis
Eucgr.K01858 1.0kb downstream 1.0kb downstream 1000 false Chr11: 24393386-24394385 Eucalyptus grandis
Eucgr.K01858 2.0kb upstream 2.0kb upstream 3441 true Chr11: 24389945-24393385 Eucalyptus grandis
Eucgr.K01858 2.0kb upstream 2.0kb upstream 2000 false Chr11: 24389945-24391944 Eucalyptus grandis
Eucgr.K01858 2.0kb downstream 2.0kb downstream 3441 true Chr11: 24391945-24395385 Eucalyptus grandis
Eucgr.K01858 2.0kb downstream 2.0kb downstream 2000 false Chr11: 24393386-24395385 Eucalyptus grandis
Eucgr.K01858 5.0kb upstream 5.0kb upstream 6441 true Chr11: 24386945-24393385 Eucalyptus grandis
Eucgr.K01858 5.0kb upstream 5.0kb upstream 5000 false Chr11: 24386945-24391944 Eucalyptus grandis
Eucgr.K01858 5.0kb downstream 5.0kb downstream 6441 true Chr11: 24391945-24398385 Eucalyptus grandis
Eucgr.K01858 5.0kb downstream 5.0kb downstream 5000 false Chr11: 24393386-24398385 Eucalyptus grandis
Eucgr.K01858 10.0kb upstream 10.0kb upstream 11441 true Chr11: 24381945-24393385 Eucalyptus grandis
Eucgr.K01858 10.0kb upstream 10.0kb upstream 10000 false Chr11: 24381945-24391944 Eucalyptus grandis
Eucgr.K01858 10.0kb downstream 10.0kb downstream 11441 true Chr11: 24391945-24403385 Eucalyptus grandis
Eucgr.K01858 10.0kb downstream 10.0kb downstream 10000 false Chr11: 24393386-24403385 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792133 5273 Angiosperm View MSA
124067401 5270 Rosid View MSA
123743891 5271 Pentapetalae View MSA
122796538 5272 Eudicot View MSA
121063384 5274 Embryophyte View MSA
123103137 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.0156 0.0 153.578 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.49206 0.0 13.2023    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain