Gene : Eucgr.K01848 E. grandis v2.0
Defline:  (1 of 1) PTHR10429 - DNA-3-METHYLADENINE GLYCOSYLASE Genomic Order:  1555
Name:  ? Eucgr.K01848 Secondary Identifier:  ? PAC:32068420
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01848 0.5kb upstream 0.5kb upstream 4118 true Chr11: 24273276-24277393 Eucalyptus grandis
Eucgr.K01848 0.5kb upstream 0.5kb upstream 500 false Chr11: 24273276-24273775 Eucalyptus grandis
Eucgr.K01848 0.5kb downstream 0.5kb downstream 4118 true Chr11: 24273776-24277893 Eucalyptus grandis
Eucgr.K01848 0.5kb downstream 0.5kb downstream 500 false Chr11: 24277394-24277893 Eucalyptus grandis
Eucgr.K01848 1.0kb upstream 1.0kb upstream 4618 true Chr11: 24272776-24277393 Eucalyptus grandis
Eucgr.K01848 1.0kb upstream 1.0kb upstream 1000 false Chr11: 24272776-24273775 Eucalyptus grandis
Eucgr.K01848 1.0kb downstream 1.0kb downstream 4618 true Chr11: 24273776-24278393 Eucalyptus grandis
Eucgr.K01848 1.0kb downstream 1.0kb downstream 1000 false Chr11: 24277394-24278393 Eucalyptus grandis
Eucgr.K01848 2.0kb upstream 2.0kb upstream 5618 true Chr11: 24271776-24277393 Eucalyptus grandis
Eucgr.K01848 2.0kb upstream 2.0kb upstream 2000 false Chr11: 24271776-24273775 Eucalyptus grandis
Eucgr.K01848 2.0kb downstream 2.0kb downstream 5618 true Chr11: 24273776-24279393 Eucalyptus grandis
Eucgr.K01848 2.0kb downstream 2.0kb downstream 2000 false Chr11: 24277394-24279393 Eucalyptus grandis
Eucgr.K01848 5.0kb upstream 5.0kb upstream 8618 true Chr11: 24268776-24277393 Eucalyptus grandis
Eucgr.K01848 5.0kb upstream 5.0kb upstream 5000 false Chr11: 24268776-24273775 Eucalyptus grandis
Eucgr.K01848 5.0kb downstream 5.0kb downstream 8618 true Chr11: 24273776-24282393 Eucalyptus grandis
Eucgr.K01848 5.0kb downstream 5.0kb downstream 5000 false Chr11: 24277394-24282393 Eucalyptus grandis
Eucgr.K01848 10.0kb upstream 10.0kb upstream 13618 true Chr11: 24263776-24277393 Eucalyptus grandis
Eucgr.K01848 10.0kb upstream 10.0kb upstream 10000 false Chr11: 24263776-24273775 Eucalyptus grandis
Eucgr.K01848 10.0kb downstream 10.0kb downstream 13618 true Chr11: 24273776-24287393 Eucalyptus grandis
Eucgr.K01848 10.0kb downstream 10.0kb downstream 10000 false Chr11: 24277394-24287393 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071357 5270 Rosid View MSA
123741300 5271 Pentapetalae View MSA
122788938 5272 Eudicot View MSA
122044995 5273 Angiosperm View MSA
121344812 5274 Embryophyte View MSA
123380104 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.96376 0.0 7.98677    
cufflinks 3.09255 0.0 8.318    
cufflinks 1.99734 0.0 5.61738   Low
cufflinks 3.45312 0.0 9.19313    
cufflinks 11.5929 0.0 27.4083   High
cufflinks 4.68169 0.0 12.0193    

0 Strain