Gene : Eucgr.K01865 E. grandis v2.0
Defline:  (1 of 10) PF13516 - Leucine Rich repeat (LRR_6) Genomic Order:  1570
Name:  ? Eucgr.K01865 Secondary Identifier:  ? PAC:32068707
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01865 0.5kb upstream 0.5kb upstream 5181 true Chr11: 24475353-24480533 Eucalyptus grandis
Eucgr.K01865 0.5kb upstream 0.5kb upstream 500 false Chr11: 24475353-24475852 Eucalyptus grandis
Eucgr.K01865 0.5kb downstream 0.5kb downstream 5181 true Chr11: 24475853-24481033 Eucalyptus grandis
Eucgr.K01865 0.5kb downstream 0.5kb downstream 500 false Chr11: 24480534-24481033 Eucalyptus grandis
Eucgr.K01865 1.0kb upstream 1.0kb upstream 5681 true Chr11: 24474853-24480533 Eucalyptus grandis
Eucgr.K01865 1.0kb upstream 1.0kb upstream 1000 false Chr11: 24474853-24475852 Eucalyptus grandis
Eucgr.K01865 1.0kb downstream 1.0kb downstream 5681 true Chr11: 24475853-24481533 Eucalyptus grandis
Eucgr.K01865 1.0kb downstream 1.0kb downstream 1000 false Chr11: 24480534-24481533 Eucalyptus grandis
Eucgr.K01865 2.0kb upstream 2.0kb upstream 6681 true Chr11: 24473853-24480533 Eucalyptus grandis
Eucgr.K01865 2.0kb upstream 2.0kb upstream 2000 false Chr11: 24473853-24475852 Eucalyptus grandis
Eucgr.K01865 2.0kb downstream 2.0kb downstream 6681 true Chr11: 24475853-24482533 Eucalyptus grandis
Eucgr.K01865 2.0kb downstream 2.0kb downstream 2000 false Chr11: 24480534-24482533 Eucalyptus grandis
Eucgr.K01865 5.0kb upstream 5.0kb upstream 9681 true Chr11: 24470853-24480533 Eucalyptus grandis
Eucgr.K01865 5.0kb upstream 5.0kb upstream 5000 false Chr11: 24470853-24475852 Eucalyptus grandis
Eucgr.K01865 5.0kb downstream 5.0kb downstream 9681 true Chr11: 24475853-24485533 Eucalyptus grandis
Eucgr.K01865 5.0kb downstream 5.0kb downstream 5000 false Chr11: 24480534-24485533 Eucalyptus grandis
Eucgr.K01865 10.0kb upstream 10.0kb upstream 14681 true Chr11: 24465853-24480533 Eucalyptus grandis
Eucgr.K01865 10.0kb upstream 10.0kb upstream 10000 false Chr11: 24465853-24475852 Eucalyptus grandis
Eucgr.K01865 10.0kb downstream 10.0kb downstream 14681 true Chr11: 24475853-24490533 Eucalyptus grandis
Eucgr.K01865 10.0kb downstream 10.0kb downstream 10000 false Chr11: 24480534-24490533 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063715 5270 Rosid View MSA
123747027 5271 Pentapetalae View MSA
122786324 5272 Eudicot View MSA
122045297 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121345257 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.55945 0.0 11.6897   Low
cufflinks 13.6135 0.0 31.2976    
cufflinks 4.2952 0.0 11.0554   Low
cufflinks 12.1904 0.0 28.2774    
cufflinks 16.9767 0.0 38.5268   High
cufflinks 9.25377 0.0 22.1589    

0 Strain