Gene : Eucgr.K01824 E. grandis v2.0
Defline:  (1 of 2) PTHR12231:SF111 - MATRIX-REMODELING-ASSOCIATED PROTEIN 8 Genomic Order:  1535
Name:  ? Eucgr.K01824 Secondary Identifier:  ? PAC:32067523
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01824 0.5kb upstream 0.5kb upstream 10982 true Chr11: 23793589-23804570 Eucalyptus grandis
Eucgr.K01824 0.5kb upstream 0.5kb upstream 500 false Chr11: 23804071-23804570 Eucalyptus grandis
Eucgr.K01824 0.5kb downstream 0.5kb downstream 10982 true Chr11: 23793089-23804070 Eucalyptus grandis
Eucgr.K01824 0.5kb downstream 0.5kb downstream 500 false Chr11: 23793089-23793588 Eucalyptus grandis
Eucgr.K01824 1.0kb upstream 1.0kb upstream 11482 true Chr11: 23793589-23805070 Eucalyptus grandis
Eucgr.K01824 1.0kb upstream 1.0kb upstream 1000 false Chr11: 23804071-23805070 Eucalyptus grandis
Eucgr.K01824 1.0kb downstream 1.0kb downstream 11482 true Chr11: 23792589-23804070 Eucalyptus grandis
Eucgr.K01824 1.0kb downstream 1.0kb downstream 1000 false Chr11: 23792589-23793588 Eucalyptus grandis
Eucgr.K01824 2.0kb upstream 2.0kb upstream 12482 true Chr11: 23793589-23806070 Eucalyptus grandis
Eucgr.K01824 2.0kb upstream 2.0kb upstream 2000 false Chr11: 23804071-23806070 Eucalyptus grandis
Eucgr.K01824 2.0kb downstream 2.0kb downstream 12482 true Chr11: 23791589-23804070 Eucalyptus grandis
Eucgr.K01824 2.0kb downstream 2.0kb downstream 2000 false Chr11: 23791589-23793588 Eucalyptus grandis
Eucgr.K01824 5.0kb upstream 5.0kb upstream 15482 true Chr11: 23793589-23809070 Eucalyptus grandis
Eucgr.K01824 5.0kb upstream 5.0kb upstream 5000 false Chr11: 23804071-23809070 Eucalyptus grandis
Eucgr.K01824 5.0kb downstream 5.0kb downstream 15482 true Chr11: 23788589-23804070 Eucalyptus grandis
Eucgr.K01824 5.0kb downstream 5.0kb downstream 5000 false Chr11: 23788589-23793588 Eucalyptus grandis
Eucgr.K01824 10.0kb upstream 10.0kb upstream 20482 true Chr11: 23793589-23814070 Eucalyptus grandis
Eucgr.K01824 10.0kb upstream 10.0kb upstream 10000 false Chr11: 23804071-23814070 Eucalyptus grandis
Eucgr.K01824 10.0kb downstream 10.0kb downstream 20482 true Chr11: 23783589-23804070 Eucalyptus grandis
Eucgr.K01824 10.0kb downstream 10.0kb downstream 10000 false Chr11: 23783589-23793588 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067502 5270 Rosid View MSA
123738309 5271 Pentapetalae View MSA
122792566 5272 Eudicot View MSA
122046652 5273 Angiosperm View MSA
121347654 5274 Embryophyte View MSA
123380591 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.1243 0.0 37.6771    
cufflinks 8.57451 0.0 27.6994    
cufflinks 6.93611 0.0 26.2346    
cufflinks 5.1988 0.0 40.5766   Low
cufflinks 19.4336 0.0 51.7226    
cufflinks 37.439 0.0 101.05 High High

0 Strain