Gene : Eucgr.K01828 E. grandis v2.0
Defline:  (1 of 16) PF03110 - SBP domain (SBP) Genomic Order:  1538
Name:  ? Eucgr.K01828 Secondary Identifier:  ? PAC:32068216
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01828 0.5kb upstream 0.5kb upstream 3314 true Chr11: 23807022-23810335 Eucalyptus grandis
Eucgr.K01828 0.5kb upstream 0.5kb upstream 500 false Chr11: 23809836-23810335 Eucalyptus grandis
Eucgr.K01828 0.5kb downstream 0.5kb downstream 3314 true Chr11: 23806522-23809835 Eucalyptus grandis
Eucgr.K01828 0.5kb downstream 0.5kb downstream 500 false Chr11: 23806522-23807021 Eucalyptus grandis
Eucgr.K01828 1.0kb upstream 1.0kb upstream 3814 true Chr11: 23807022-23810835 Eucalyptus grandis
Eucgr.K01828 1.0kb upstream 1.0kb upstream 1000 false Chr11: 23809836-23810835 Eucalyptus grandis
Eucgr.K01828 1.0kb downstream 1.0kb downstream 3814 true Chr11: 23806022-23809835 Eucalyptus grandis
Eucgr.K01828 1.0kb downstream 1.0kb downstream 1000 false Chr11: 23806022-23807021 Eucalyptus grandis
Eucgr.K01828 2.0kb upstream 2.0kb upstream 4814 true Chr11: 23807022-23811835 Eucalyptus grandis
Eucgr.K01828 2.0kb upstream 2.0kb upstream 2000 false Chr11: 23809836-23811835 Eucalyptus grandis
Eucgr.K01828 2.0kb downstream 2.0kb downstream 4814 true Chr11: 23805022-23809835 Eucalyptus grandis
Eucgr.K01828 2.0kb downstream 2.0kb downstream 2000 false Chr11: 23805022-23807021 Eucalyptus grandis
Eucgr.K01828 5.0kb upstream 5.0kb upstream 7814 true Chr11: 23807022-23814835 Eucalyptus grandis
Eucgr.K01828 5.0kb upstream 5.0kb upstream 5000 false Chr11: 23809836-23814835 Eucalyptus grandis
Eucgr.K01828 5.0kb downstream 5.0kb downstream 7814 true Chr11: 23802022-23809835 Eucalyptus grandis
Eucgr.K01828 5.0kb downstream 5.0kb downstream 5000 false Chr11: 23802022-23807021 Eucalyptus grandis
Eucgr.K01828 10.0kb upstream 10.0kb upstream 12814 true Chr11: 23807022-23819835 Eucalyptus grandis
Eucgr.K01828 10.0kb upstream 10.0kb upstream 10000 false Chr11: 23809836-23819835 Eucalyptus grandis
Eucgr.K01828 10.0kb downstream 10.0kb downstream 12814 true Chr11: 23797022-23809835 Eucalyptus grandis
Eucgr.K01828 10.0kb downstream 10.0kb downstream 10000 false Chr11: 23797022-23807021 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062947 5270 Rosid View MSA
123736382 5271 Pentapetalae View MSA
122786018 5272 Eudicot View MSA
122041751 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121309885 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.4945 0.0 30.5408    
cufflinks 17.4333 0.0 39.0371    
cufflinks 18.1725 0.0 40.6465    
cufflinks 2.55732 0.0 6.77266   Low
cufflinks 8.69968 0.0 20.3783    
cufflinks 3.48957 0.0 8.85269   Low

0 Strain