Gene : Eucgr.K01836 E. grandis v2.0
Defline:  (1 of 1) PTHR33493:SF2 - LATE EMBRYOGENESIS ABUNDANT PROTEIN 4-5 Genomic Order:  1545
Name:  ? Eucgr.K01836 Secondary Identifier:  ? PAC:32068738
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01836 0.5kb upstream 0.5kb upstream 1114 true Chr11: 23941764-23942877 Eucalyptus grandis
Eucgr.K01836 0.5kb upstream 0.5kb upstream 500 false Chr11: 23942378-23942877 Eucalyptus grandis
Eucgr.K01836 0.5kb downstream 0.5kb downstream 1114 true Chr11: 23941264-23942377 Eucalyptus grandis
Eucgr.K01836 0.5kb downstream 0.5kb downstream 500 false Chr11: 23941264-23941763 Eucalyptus grandis
Eucgr.K01836 1.0kb upstream 1.0kb upstream 1614 true Chr11: 23941764-23943377 Eucalyptus grandis
Eucgr.K01836 1.0kb upstream 1.0kb upstream 1000 false Chr11: 23942378-23943377 Eucalyptus grandis
Eucgr.K01836 1.0kb downstream 1.0kb downstream 1614 true Chr11: 23940764-23942377 Eucalyptus grandis
Eucgr.K01836 1.0kb downstream 1.0kb downstream 1000 false Chr11: 23940764-23941763 Eucalyptus grandis
Eucgr.K01836 2.0kb upstream 2.0kb upstream 2614 true Chr11: 23941764-23944377 Eucalyptus grandis
Eucgr.K01836 2.0kb upstream 2.0kb upstream 2000 false Chr11: 23942378-23944377 Eucalyptus grandis
Eucgr.K01836 2.0kb downstream 2.0kb downstream 2614 true Chr11: 23939764-23942377 Eucalyptus grandis
Eucgr.K01836 2.0kb downstream 2.0kb downstream 2000 false Chr11: 23939764-23941763 Eucalyptus grandis
Eucgr.K01836 5.0kb upstream 5.0kb upstream 5614 true Chr11: 23941764-23947377 Eucalyptus grandis
Eucgr.K01836 5.0kb upstream 5.0kb upstream 5000 false Chr11: 23942378-23947377 Eucalyptus grandis
Eucgr.K01836 5.0kb downstream 5.0kb downstream 5614 true Chr11: 23936764-23942377 Eucalyptus grandis
Eucgr.K01836 5.0kb downstream 5.0kb downstream 5000 false Chr11: 23936764-23941763 Eucalyptus grandis
Eucgr.K01836 10.0kb upstream 10.0kb upstream 10614 true Chr11: 23941764-23952377 Eucalyptus grandis
Eucgr.K01836 10.0kb upstream 10.0kb upstream 10000 false Chr11: 23942378-23952377 Eucalyptus grandis
Eucgr.K01836 10.0kb downstream 10.0kb downstream 10614 true Chr11: 23931764-23942377 Eucalyptus grandis
Eucgr.K01836 10.0kb downstream 10.0kb downstream 10000 false Chr11: 23931764-23941763 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073958 5270 Rosid View MSA
123749159 5271 Pentapetalae View MSA
122794913 5272 Eudicot View MSA
122046443 5273 Angiosperm View MSA
121349982 5274 Embryophyte View MSA
123381528 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.16912 0.0 9.36975    
cufflinks 3.71508 0.0 10.8307    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.86541 0.0 19.034   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain