Gene : Eucgr.K01823 E. grandis v2.0
Defline:  (1 of 2) PF07986 - Tubulin binding cofactor C (TBCC) Genomic Order:  1534
Name:  ? Eucgr.K01823 Secondary Identifier:  ? PAC:32068139
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01823 0.5kb upstream 0.5kb upstream 9655 true Chr11: 23783853-23793507 Eucalyptus grandis
Eucgr.K01823 0.5kb upstream 0.5kb upstream 500 false Chr11: 23783853-23784352 Eucalyptus grandis
Eucgr.K01823 0.5kb downstream 0.5kb downstream 9655 true Chr11: 23784353-23794007 Eucalyptus grandis
Eucgr.K01823 0.5kb downstream 0.5kb downstream 500 false Chr11: 23793508-23794007 Eucalyptus grandis
Eucgr.K01823 1.0kb upstream 1.0kb upstream 10155 true Chr11: 23783353-23793507 Eucalyptus grandis
Eucgr.K01823 1.0kb upstream 1.0kb upstream 1000 false Chr11: 23783353-23784352 Eucalyptus grandis
Eucgr.K01823 1.0kb downstream 1.0kb downstream 10155 true Chr11: 23784353-23794507 Eucalyptus grandis
Eucgr.K01823 1.0kb downstream 1.0kb downstream 1000 false Chr11: 23793508-23794507 Eucalyptus grandis
Eucgr.K01823 2.0kb upstream 2.0kb upstream 11155 true Chr11: 23782353-23793507 Eucalyptus grandis
Eucgr.K01823 2.0kb upstream 2.0kb upstream 2000 false Chr11: 23782353-23784352 Eucalyptus grandis
Eucgr.K01823 2.0kb downstream 2.0kb downstream 11155 true Chr11: 23784353-23795507 Eucalyptus grandis
Eucgr.K01823 2.0kb downstream 2.0kb downstream 2000 false Chr11: 23793508-23795507 Eucalyptus grandis
Eucgr.K01823 5.0kb upstream 5.0kb upstream 14155 true Chr11: 23779353-23793507 Eucalyptus grandis
Eucgr.K01823 5.0kb upstream 5.0kb upstream 5000 false Chr11: 23779353-23784352 Eucalyptus grandis
Eucgr.K01823 5.0kb downstream 5.0kb downstream 14155 true Chr11: 23784353-23798507 Eucalyptus grandis
Eucgr.K01823 5.0kb downstream 5.0kb downstream 5000 false Chr11: 23793508-23798507 Eucalyptus grandis
Eucgr.K01823 10.0kb upstream 10.0kb upstream 19155 true Chr11: 23774353-23793507 Eucalyptus grandis
Eucgr.K01823 10.0kb upstream 10.0kb upstream 10000 false Chr11: 23774353-23784352 Eucalyptus grandis
Eucgr.K01823 10.0kb downstream 10.0kb downstream 19155 true Chr11: 23784353-23803507 Eucalyptus grandis
Eucgr.K01823 10.0kb downstream 10.0kb downstream 10000 false Chr11: 23793508-23803507 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060607 5270 Rosid View MSA
123737607 5271 Pentapetalae View MSA
122797393 5272 Eudicot View MSA
122043018 5273 Angiosperm View MSA
121349470 5274 Embryophyte View MSA
123427558 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.4803 0.0 37.5348    
cufflinks 24.1082 0.0 54.1631   High
cufflinks 15.3818 0.0 39.2788   Low
cufflinks 23.1003 0.0 52.0489    
cufflinks 18.1363 0.0 40.6655    
cufflinks 23.3474 0.0 57.8305    

0 Strain