Gene : Eucgr.K01721 E. grandis v2.0
Defline:  (1 of 5) PTHR11225 - NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN Genomic Order:  1470
Name:  ? Eucgr.K01721 Secondary Identifier:  ? PAC:32069516
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01721 0.5kb upstream 0.5kb upstream 10151 true Chr11: 22076957-22087107 Eucalyptus grandis
Eucgr.K01721 0.5kb upstream 0.5kb upstream 500 false Chr11: 22076957-22077456 Eucalyptus grandis
Eucgr.K01721 0.5kb downstream 0.5kb downstream 10151 true Chr11: 22077457-22087607 Eucalyptus grandis
Eucgr.K01721 0.5kb downstream 0.5kb downstream 500 false Chr11: 22087108-22087607 Eucalyptus grandis
Eucgr.K01721 1.0kb upstream 1.0kb upstream 10651 true Chr11: 22076457-22087107 Eucalyptus grandis
Eucgr.K01721 1.0kb upstream 1.0kb upstream 1000 false Chr11: 22076457-22077456 Eucalyptus grandis
Eucgr.K01721 1.0kb downstream 1.0kb downstream 10651 true Chr11: 22077457-22088107 Eucalyptus grandis
Eucgr.K01721 1.0kb downstream 1.0kb downstream 1000 false Chr11: 22087108-22088107 Eucalyptus grandis
Eucgr.K01721 2.0kb upstream 2.0kb upstream 11651 true Chr11: 22075457-22087107 Eucalyptus grandis
Eucgr.K01721 2.0kb upstream 2.0kb upstream 2000 false Chr11: 22075457-22077456 Eucalyptus grandis
Eucgr.K01721 2.0kb downstream 2.0kb downstream 11651 true Chr11: 22077457-22089107 Eucalyptus grandis
Eucgr.K01721 2.0kb downstream 2.0kb downstream 2000 false Chr11: 22087108-22089107 Eucalyptus grandis
Eucgr.K01721 5.0kb upstream 5.0kb upstream 14651 true Chr11: 22072457-22087107 Eucalyptus grandis
Eucgr.K01721 5.0kb upstream 5.0kb upstream 5000 false Chr11: 22072457-22077456 Eucalyptus grandis
Eucgr.K01721 5.0kb downstream 5.0kb downstream 14651 true Chr11: 22077457-22092107 Eucalyptus grandis
Eucgr.K01721 5.0kb downstream 5.0kb downstream 5000 false Chr11: 22087108-22092107 Eucalyptus grandis
Eucgr.K01721 10.0kb upstream 10.0kb upstream 19651 true Chr11: 22067457-22087107 Eucalyptus grandis
Eucgr.K01721 10.0kb upstream 10.0kb upstream 10000 false Chr11: 22067457-22077456 Eucalyptus grandis
Eucgr.K01721 10.0kb downstream 10.0kb downstream 19651 true Chr11: 22077457-22097107 Eucalyptus grandis
Eucgr.K01721 10.0kb downstream 10.0kb downstream 10000 false Chr11: 22087108-22097107 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073595 5270 Rosid View MSA
123740371 5271 Pentapetalae View MSA
122788822 5272 Eudicot View MSA
122043795 5273 Angiosperm View MSA
121346539 5274 Embryophyte View MSA
123424897 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.961 0.0 9.34406    
cufflinks 2.6213 0.0 6.38534    
cufflinks 4.65528 0.0 10.7831    
cufflinks 1.998 0.0 4.98318   Low
cufflinks 2.88014 0.0 6.9691    
cufflinks 5.13447 0.0 11.9068   High

0 Strain