Gene : Eucgr.K01669 E. grandis v2.0
Defline:  (1 of 1) PTHR23077:SF27 - SPERMATOGENESIS-ASSOCIATED PROTEIN 5 Genomic Order:  1349
Name:  ? Eucgr.K01669 Secondary Identifier:  ? PAC:32067736
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01669 0.5kb upstream 0.5kb upstream 9916 true Chr11: 19666899-19676814 Eucalyptus grandis
Eucgr.K01669 0.5kb upstream 0.5kb upstream 500 false Chr11: 19676315-19676814 Eucalyptus grandis
Eucgr.K01669 0.5kb downstream 0.5kb downstream 9916 true Chr11: 19666399-19676314 Eucalyptus grandis
Eucgr.K01669 0.5kb downstream 0.5kb downstream 500 false Chr11: 19666399-19666898 Eucalyptus grandis
Eucgr.K01669 1.0kb upstream 1.0kb upstream 10416 true Chr11: 19666899-19677314 Eucalyptus grandis
Eucgr.K01669 1.0kb upstream 1.0kb upstream 1000 false Chr11: 19676315-19677314 Eucalyptus grandis
Eucgr.K01669 1.0kb downstream 1.0kb downstream 10416 true Chr11: 19665899-19676314 Eucalyptus grandis
Eucgr.K01669 1.0kb downstream 1.0kb downstream 1000 false Chr11: 19665899-19666898 Eucalyptus grandis
Eucgr.K01669 2.0kb upstream 2.0kb upstream 11416 true Chr11: 19666899-19678314 Eucalyptus grandis
Eucgr.K01669 2.0kb upstream 2.0kb upstream 2000 false Chr11: 19676315-19678314 Eucalyptus grandis
Eucgr.K01669 2.0kb downstream 2.0kb downstream 11416 true Chr11: 19664899-19676314 Eucalyptus grandis
Eucgr.K01669 2.0kb downstream 2.0kb downstream 2000 false Chr11: 19664899-19666898 Eucalyptus grandis
Eucgr.K01669 5.0kb upstream 5.0kb upstream 14416 true Chr11: 19666899-19681314 Eucalyptus grandis
Eucgr.K01669 5.0kb upstream 5.0kb upstream 5000 false Chr11: 19676315-19681314 Eucalyptus grandis
Eucgr.K01669 5.0kb downstream 5.0kb downstream 14416 true Chr11: 19661899-19676314 Eucalyptus grandis
Eucgr.K01669 5.0kb downstream 5.0kb downstream 5000 false Chr11: 19661899-19666898 Eucalyptus grandis
Eucgr.K01669 10.0kb upstream 10.0kb upstream 19416 true Chr11: 19666899-19686314 Eucalyptus grandis
Eucgr.K01669 10.0kb upstream 10.0kb upstream 10000 false Chr11: 19676315-19686314 Eucalyptus grandis
Eucgr.K01669 10.0kb downstream 10.0kb downstream 19416 true Chr11: 19656899-19676314 Eucalyptus grandis
Eucgr.K01669 10.0kb downstream 10.0kb downstream 10000 false Chr11: 19656899-19666898 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067886 5270 Rosid View MSA
123737682 5271 Pentapetalae View MSA
122793147 5272 Eudicot View MSA
122041889 5273 Angiosperm View MSA
121345411 5274 Embryophyte View MSA
123426108 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.38889 0.0 9.34413    
cufflinks 1.25872 0.0 3.48174   Low
cufflinks 2.85248 0.0 6.855    
cufflinks 4.18491 0.0 9.67873    
cufflinks 2.29523 0.0 6.72743    
cufflinks 4.23507 0.0 9.89926    

0 Strain