Gene : Eucgr.K01614 E. grandis v2.0
Defline:  (1 of 2) PF00651//PF11900 - BTB/POZ domain (BTB) // Domain of unknown function (DUF3420) (DUF3420) Genomic Order:  1394
Name:  ? Eucgr.K01614 Secondary Identifier:  ? PAC:32065973
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01614 0.5kb upstream 0.5kb upstream 3164 true Chr11: 20157819-20160982 Eucalyptus grandis
Eucgr.K01614 0.5kb upstream 0.5kb upstream 500 false Chr11: 20160483-20160982 Eucalyptus grandis
Eucgr.K01614 0.5kb downstream 0.5kb downstream 3164 true Chr11: 20157319-20160482 Eucalyptus grandis
Eucgr.K01614 0.5kb downstream 0.5kb downstream 500 false Chr11: 20157319-20157818 Eucalyptus grandis
Eucgr.K01614 1.0kb upstream 1.0kb upstream 3664 true Chr11: 20157819-20161482 Eucalyptus grandis
Eucgr.K01614 1.0kb upstream 1.0kb upstream 1000 false Chr11: 20160483-20161482 Eucalyptus grandis
Eucgr.K01614 1.0kb downstream 1.0kb downstream 3664 true Chr11: 20156819-20160482 Eucalyptus grandis
Eucgr.K01614 1.0kb downstream 1.0kb downstream 1000 false Chr11: 20156819-20157818 Eucalyptus grandis
Eucgr.K01614 2.0kb upstream 2.0kb upstream 4664 true Chr11: 20157819-20162482 Eucalyptus grandis
Eucgr.K01614 2.0kb upstream 2.0kb upstream 2000 false Chr11: 20160483-20162482 Eucalyptus grandis
Eucgr.K01614 2.0kb downstream 2.0kb downstream 4664 true Chr11: 20155819-20160482 Eucalyptus grandis
Eucgr.K01614 2.0kb downstream 2.0kb downstream 2000 false Chr11: 20155819-20157818 Eucalyptus grandis
Eucgr.K01614 5.0kb upstream 5.0kb upstream 7664 true Chr11: 20157819-20165482 Eucalyptus grandis
Eucgr.K01614 5.0kb upstream 5.0kb upstream 5000 false Chr11: 20160483-20165482 Eucalyptus grandis
Eucgr.K01614 5.0kb downstream 5.0kb downstream 7664 true Chr11: 20152819-20160482 Eucalyptus grandis
Eucgr.K01614 5.0kb downstream 5.0kb downstream 5000 false Chr11: 20152819-20157818 Eucalyptus grandis
Eucgr.K01614 10.0kb upstream 10.0kb upstream 12664 true Chr11: 20157819-20170482 Eucalyptus grandis
Eucgr.K01614 10.0kb upstream 10.0kb upstream 10000 false Chr11: 20160483-20170482 Eucalyptus grandis
Eucgr.K01614 10.0kb downstream 10.0kb downstream 12664 true Chr11: 20147819-20160482 Eucalyptus grandis
Eucgr.K01614 10.0kb downstream 10.0kb downstream 10000 false Chr11: 20147819-20157818 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068083 5270 Rosid View MSA
123743469 5271 Pentapetalae View MSA
122790802 5272 Eudicot View MSA
122046823 5273 Angiosperm View MSA
121349965 5274 Embryophyte View MSA
123381520 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.875515 0.0 2.59653    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.37065 0.0 8.76824   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.312082 0.0 1.05651 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain