Gene : Eucgr.K01544 E. grandis v2.0
Defline:  (1 of 1) PTHR10314:SF90 - S-SULFOCYSTEINE SYNTHASE, CHLOROPLASTIC-RELATED Genomic Order:  1289
Name:  ? Eucgr.K01544 Secondary Identifier:  ? PAC:32066420
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis CYSTSYN-PWY Eucalyptus grandis pathologic  
Egrandis PWY-6936 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01544 0.5kb upstream 0.5kb upstream 7037 true Chr11: 18812837-18819873 Eucalyptus grandis
Eucgr.K01544 0.5kb upstream 0.5kb upstream 500 false Chr11: 18812837-18813336 Eucalyptus grandis
Eucgr.K01544 0.5kb downstream 0.5kb downstream 7037 true Chr11: 18813337-18820373 Eucalyptus grandis
Eucgr.K01544 0.5kb downstream 0.5kb downstream 500 false Chr11: 18819874-18820373 Eucalyptus grandis
Eucgr.K01544 1.0kb upstream 1.0kb upstream 7537 true Chr11: 18812337-18819873 Eucalyptus grandis
Eucgr.K01544 1.0kb upstream 1.0kb upstream 1000 false Chr11: 18812337-18813336 Eucalyptus grandis
Eucgr.K01544 1.0kb downstream 1.0kb downstream 7537 true Chr11: 18813337-18820873 Eucalyptus grandis
Eucgr.K01544 1.0kb downstream 1.0kb downstream 1000 false Chr11: 18819874-18820873 Eucalyptus grandis
Eucgr.K01544 2.0kb upstream 2.0kb upstream 8537 true Chr11: 18811337-18819873 Eucalyptus grandis
Eucgr.K01544 2.0kb upstream 2.0kb upstream 2000 false Chr11: 18811337-18813336 Eucalyptus grandis
Eucgr.K01544 2.0kb downstream 2.0kb downstream 8537 true Chr11: 18813337-18821873 Eucalyptus grandis
Eucgr.K01544 2.0kb downstream 2.0kb downstream 2000 false Chr11: 18819874-18821873 Eucalyptus grandis
Eucgr.K01544 5.0kb upstream 5.0kb upstream 11537 true Chr11: 18808337-18819873 Eucalyptus grandis
Eucgr.K01544 5.0kb upstream 5.0kb upstream 5000 false Chr11: 18808337-18813336 Eucalyptus grandis
Eucgr.K01544 5.0kb downstream 5.0kb downstream 11537 true Chr11: 18813337-18824873 Eucalyptus grandis
Eucgr.K01544 5.0kb downstream 5.0kb downstream 5000 false Chr11: 18819874-18824873 Eucalyptus grandis
Eucgr.K01544 10.0kb upstream 10.0kb upstream 16537 true Chr11: 18803337-18819873 Eucalyptus grandis
Eucgr.K01544 10.0kb upstream 10.0kb upstream 10000 false Chr11: 18803337-18813336 Eucalyptus grandis
Eucgr.K01544 10.0kb downstream 10.0kb downstream 16537 true Chr11: 18813337-18829873 Eucalyptus grandis
Eucgr.K01544 10.0kb downstream 10.0kb downstream 10000 false Chr11: 18819874-18829873 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067965 5270 Rosid View MSA
123741617 5271 Pentapetalae View MSA
122788921 5272 Eudicot View MSA
122042312 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.52123 0.0 22.799    
cufflinks 1.51735 0.0 4.29981    
cufflinks 3.14164 0.0 9.77525    
cufflinks 0.366756 0.0 1.3672 Low Low
cufflinks 0.848094 0.0 2.71678    
cufflinks 11.7067 0.0 27.0702   High

0 Strain