Gene : Eucgr.K01536 E. grandis v2.0
Defline:  (1 of 1) PTHR10024:SF172 - C2 AND PLANT PHOSPHORIBOSYLTRANSFERASE DOMAIN-CONTAINING PROTEIN Genomic Order:  1281
Name:  ? Eucgr.K01536 Secondary Identifier:  ? PAC:32066806
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01536 0.5kb upstream 0.5kb upstream 3858 true Chr11: 18719436-18723293 Eucalyptus grandis
Eucgr.K01536 0.5kb upstream 0.5kb upstream 500 false Chr11: 18722794-18723293 Eucalyptus grandis
Eucgr.K01536 0.5kb downstream 0.5kb downstream 3858 true Chr11: 18718936-18722793 Eucalyptus grandis
Eucgr.K01536 0.5kb downstream 0.5kb downstream 500 false Chr11: 18718936-18719435 Eucalyptus grandis
Eucgr.K01536 1.0kb upstream 1.0kb upstream 4358 true Chr11: 18719436-18723793 Eucalyptus grandis
Eucgr.K01536 1.0kb upstream 1.0kb upstream 1000 false Chr11: 18722794-18723793 Eucalyptus grandis
Eucgr.K01536 1.0kb downstream 1.0kb downstream 4358 true Chr11: 18718436-18722793 Eucalyptus grandis
Eucgr.K01536 1.0kb downstream 1.0kb downstream 1000 false Chr11: 18718436-18719435 Eucalyptus grandis
Eucgr.K01536 2.0kb upstream 2.0kb upstream 5358 true Chr11: 18719436-18724793 Eucalyptus grandis
Eucgr.K01536 2.0kb upstream 2.0kb upstream 2000 false Chr11: 18722794-18724793 Eucalyptus grandis
Eucgr.K01536 2.0kb downstream 2.0kb downstream 5358 true Chr11: 18717436-18722793 Eucalyptus grandis
Eucgr.K01536 2.0kb downstream 2.0kb downstream 2000 false Chr11: 18717436-18719435 Eucalyptus grandis
Eucgr.K01536 5.0kb upstream 5.0kb upstream 8358 true Chr11: 18719436-18727793 Eucalyptus grandis
Eucgr.K01536 5.0kb upstream 5.0kb upstream 5000 false Chr11: 18722794-18727793 Eucalyptus grandis
Eucgr.K01536 5.0kb downstream 5.0kb downstream 8358 true Chr11: 18714436-18722793 Eucalyptus grandis
Eucgr.K01536 5.0kb downstream 5.0kb downstream 5000 false Chr11: 18714436-18719435 Eucalyptus grandis
Eucgr.K01536 10.0kb upstream 10.0kb upstream 13358 true Chr11: 18719436-18732793 Eucalyptus grandis
Eucgr.K01536 10.0kb upstream 10.0kb upstream 10000 false Chr11: 18722794-18732793 Eucalyptus grandis
Eucgr.K01536 10.0kb downstream 10.0kb downstream 13358 true Chr11: 18709436-18722793 Eucalyptus grandis
Eucgr.K01536 10.0kb downstream 10.0kb downstream 10000 false Chr11: 18709436-18719435 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063540 5270 Rosid View MSA
123748968 5271 Pentapetalae View MSA
122790054 5272 Eudicot View MSA
122049348 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.38968 0.0 5.88697    
cufflinks 0.458107 0.0 1.35566 Low Low
cufflinks 1.04876 0.0 2.84094    
cufflinks 4.62508 0.0 10.9025   High
cufflinks 1.67406 0.0 4.32669    
cufflinks 0.524233 0.0 1.48345 Low Low

0 Strain