Gene : Eucgr.K01550 E. grandis v2.0
Defline:  (1 of 6) PTHR11206:SF154 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  1295
Name:  ? Eucgr.K01550 Secondary Identifier:  ? PAC:32065945
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01550 0.5kb upstream 0.5kb upstream 4873 true Chr11: 18874280-18879152 Eucalyptus grandis
Eucgr.K01550 0.5kb upstream 0.5kb upstream 500 false Chr11: 18874280-18874779 Eucalyptus grandis
Eucgr.K01550 0.5kb downstream 0.5kb downstream 4873 true Chr11: 18874780-18879652 Eucalyptus grandis
Eucgr.K01550 0.5kb downstream 0.5kb downstream 500 false Chr11: 18879153-18879652 Eucalyptus grandis
Eucgr.K01550 1.0kb upstream 1.0kb upstream 5373 true Chr11: 18873780-18879152 Eucalyptus grandis
Eucgr.K01550 1.0kb upstream 1.0kb upstream 1000 false Chr11: 18873780-18874779 Eucalyptus grandis
Eucgr.K01550 1.0kb downstream 1.0kb downstream 5373 true Chr11: 18874780-18880152 Eucalyptus grandis
Eucgr.K01550 1.0kb downstream 1.0kb downstream 1000 false Chr11: 18879153-18880152 Eucalyptus grandis
Eucgr.K01550 2.0kb upstream 2.0kb upstream 6373 true Chr11: 18872780-18879152 Eucalyptus grandis
Eucgr.K01550 2.0kb upstream 2.0kb upstream 2000 false Chr11: 18872780-18874779 Eucalyptus grandis
Eucgr.K01550 2.0kb downstream 2.0kb downstream 6373 true Chr11: 18874780-18881152 Eucalyptus grandis
Eucgr.K01550 2.0kb downstream 2.0kb downstream 2000 false Chr11: 18879153-18881152 Eucalyptus grandis
Eucgr.K01550 5.0kb upstream 5.0kb upstream 9373 true Chr11: 18869780-18879152 Eucalyptus grandis
Eucgr.K01550 5.0kb upstream 5.0kb upstream 5000 false Chr11: 18869780-18874779 Eucalyptus grandis
Eucgr.K01550 5.0kb downstream 5.0kb downstream 9373 true Chr11: 18874780-18884152 Eucalyptus grandis
Eucgr.K01550 5.0kb downstream 5.0kb downstream 5000 false Chr11: 18879153-18884152 Eucalyptus grandis
Eucgr.K01550 10.0kb upstream 10.0kb upstream 14373 true Chr11: 18864780-18879152 Eucalyptus grandis
Eucgr.K01550 10.0kb upstream 10.0kb upstream 10000 false Chr11: 18864780-18874779 Eucalyptus grandis
Eucgr.K01550 10.0kb downstream 10.0kb downstream 14373 true Chr11: 18874780-18889152 Eucalyptus grandis
Eucgr.K01550 10.0kb downstream 10.0kb downstream 10000 false Chr11: 18879153-18889152 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066814 5270 Rosid View MSA
123744477 5271 Pentapetalae View MSA
122791192 5272 Eudicot View MSA
122050429 5273 Angiosperm View MSA
121311902 5274 Embryophyte View MSA
123349133 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.9823 0.0 18.9215    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.54933 0.0 22.1916    
cufflinks 0.122065 0.0 0.459909 Low Low
cufflinks 1.43226 0.0 4.00082    
cufflinks 1.90798 0.0 5.24253    

0 Strain