Gene : Eucgr.K01429 E. grandis v2.0
Defline:  (1 of 1) PTHR17204:SF5 - PRE-MRNA-PROCESSING FACTOR 39 Genomic Order:  1200
Name:  ? Eucgr.K01429 Secondary Identifier:  ? PAC:32067197
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01429 0.5kb upstream 0.5kb upstream 15595 true Chr11: 17611852-17627446 Eucalyptus grandis
Eucgr.K01429 0.5kb upstream 0.5kb upstream 500 false Chr11: 17626947-17627446 Eucalyptus grandis
Eucgr.K01429 0.5kb downstream 0.5kb downstream 15595 true Chr11: 17611352-17626946 Eucalyptus grandis
Eucgr.K01429 0.5kb downstream 0.5kb downstream 500 false Chr11: 17611352-17611851 Eucalyptus grandis
Eucgr.K01429 1.0kb upstream 1.0kb upstream 16095 true Chr11: 17611852-17627946 Eucalyptus grandis
Eucgr.K01429 1.0kb upstream 1.0kb upstream 1000 false Chr11: 17626947-17627946 Eucalyptus grandis
Eucgr.K01429 1.0kb downstream 1.0kb downstream 16095 true Chr11: 17610852-17626946 Eucalyptus grandis
Eucgr.K01429 1.0kb downstream 1.0kb downstream 1000 false Chr11: 17610852-17611851 Eucalyptus grandis
Eucgr.K01429 2.0kb upstream 2.0kb upstream 17095 true Chr11: 17611852-17628946 Eucalyptus grandis
Eucgr.K01429 2.0kb upstream 2.0kb upstream 2000 false Chr11: 17626947-17628946 Eucalyptus grandis
Eucgr.K01429 2.0kb downstream 2.0kb downstream 17095 true Chr11: 17609852-17626946 Eucalyptus grandis
Eucgr.K01429 2.0kb downstream 2.0kb downstream 2000 false Chr11: 17609852-17611851 Eucalyptus grandis
Eucgr.K01429 5.0kb upstream 5.0kb upstream 20095 true Chr11: 17611852-17631946 Eucalyptus grandis
Eucgr.K01429 5.0kb upstream 5.0kb upstream 5000 false Chr11: 17626947-17631946 Eucalyptus grandis
Eucgr.K01429 5.0kb downstream 5.0kb downstream 20095 true Chr11: 17606852-17626946 Eucalyptus grandis
Eucgr.K01429 5.0kb downstream 5.0kb downstream 5000 false Chr11: 17606852-17611851 Eucalyptus grandis
Eucgr.K01429 10.0kb upstream 10.0kb upstream 25095 true Chr11: 17611852-17636946 Eucalyptus grandis
Eucgr.K01429 10.0kb upstream 10.0kb upstream 10000 false Chr11: 17626947-17636946 Eucalyptus grandis
Eucgr.K01429 10.0kb downstream 10.0kb downstream 25095 true Chr11: 17601852-17626946 Eucalyptus grandis
Eucgr.K01429 10.0kb downstream 10.0kb downstream 10000 false Chr11: 17601852-17611851 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068897 5270 Rosid View MSA
123746236 5271 Pentapetalae View MSA
122794509 5272 Eudicot View MSA
122048891 5273 Angiosperm View MSA
121349849 5274 Embryophyte View MSA
123426942 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.0801 0.0 86.4548 High  
cufflinks 53.3826 0.0 124.782 High High
cufflinks 37.687 0.0 85.7786 High  
cufflinks 51.1356 0.0 119.443 High High
cufflinks 41.6655 0.0 95.3723 High  
cufflinks 35.9938 0.0 81.231 High  

0 Strain