Gene : Eucgr.K01473 E. grandis v2.0
Defline:  (1 of 1) PTHR32195:SF12 - TYROSINE-SPECIFIC TRANSPORT PROTEIN-RELATED Genomic Order:  1228
Name:  ? Eucgr.K01473 Secondary Identifier:  ? PAC:32067502
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01473 0.5kb upstream 0.5kb upstream 3019 true Chr11: 18105790-18108808 Eucalyptus grandis
Eucgr.K01473 0.5kb upstream 0.5kb upstream 500 false Chr11: 18108309-18108808 Eucalyptus grandis
Eucgr.K01473 0.5kb downstream 0.5kb downstream 3019 true Chr11: 18105290-18108308 Eucalyptus grandis
Eucgr.K01473 0.5kb downstream 0.5kb downstream 500 false Chr11: 18105290-18105789 Eucalyptus grandis
Eucgr.K01473 1.0kb upstream 1.0kb upstream 3519 true Chr11: 18105790-18109308 Eucalyptus grandis
Eucgr.K01473 1.0kb upstream 1.0kb upstream 1000 false Chr11: 18108309-18109308 Eucalyptus grandis
Eucgr.K01473 1.0kb downstream 1.0kb downstream 3519 true Chr11: 18104790-18108308 Eucalyptus grandis
Eucgr.K01473 1.0kb downstream 1.0kb downstream 1000 false Chr11: 18104790-18105789 Eucalyptus grandis
Eucgr.K01473 2.0kb upstream 2.0kb upstream 4519 true Chr11: 18105790-18110308 Eucalyptus grandis
Eucgr.K01473 2.0kb upstream 2.0kb upstream 2000 false Chr11: 18108309-18110308 Eucalyptus grandis
Eucgr.K01473 2.0kb downstream 2.0kb downstream 4519 true Chr11: 18103790-18108308 Eucalyptus grandis
Eucgr.K01473 2.0kb downstream 2.0kb downstream 2000 false Chr11: 18103790-18105789 Eucalyptus grandis
Eucgr.K01473 5.0kb upstream 5.0kb upstream 7519 true Chr11: 18105790-18113308 Eucalyptus grandis
Eucgr.K01473 5.0kb upstream 5.0kb upstream 5000 false Chr11: 18108309-18113308 Eucalyptus grandis
Eucgr.K01473 5.0kb downstream 5.0kb downstream 7519 true Chr11: 18100790-18108308 Eucalyptus grandis
Eucgr.K01473 5.0kb downstream 5.0kb downstream 5000 false Chr11: 18100790-18105789 Eucalyptus grandis
Eucgr.K01473 10.0kb upstream 10.0kb upstream 12519 true Chr11: 18105790-18118308 Eucalyptus grandis
Eucgr.K01473 10.0kb upstream 10.0kb upstream 10000 false Chr11: 18108309-18118308 Eucalyptus grandis
Eucgr.K01473 10.0kb downstream 10.0kb downstream 12519 true Chr11: 18095790-18108308 Eucalyptus grandis
Eucgr.K01473 10.0kb downstream 10.0kb downstream 10000 false Chr11: 18095790-18105789 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062862 5270 Rosid View MSA
123741187 5271 Pentapetalae View MSA
122791918 5272 Eudicot View MSA
122042741 5273 Angiosperm View MSA
121346394 5274 Embryophyte View MSA
123426643 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.43357 0.0 4.11936    
cufflinks 4.43622 0.0 11.2635   High
cufflinks 1.52157 0.0 4.32661    
cufflinks 0.304531 0.0 1.04568 Low Low
cufflinks 0.723983 0.0 2.23932 Low  
cufflinks 0.591224 0.0 1.90142 Low  

0 Strain