Gene : Eucgr.K01474 E. grandis v2.0
Defline:  (1 of 2) PTHR10438:SF245 - THIOREDOXIN-LIKE 1-1, CHLOROPLASTIC-RELATED Genomic Order:  1229
Name:  ? Eucgr.K01474 Secondary Identifier:  ? PAC:32067483
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01474 0.5kb upstream 0.5kb upstream 3447 true Chr11: 18130801-18134247 Eucalyptus grandis
Eucgr.K01474 0.5kb upstream 0.5kb upstream 500 false Chr11: 18130801-18131300 Eucalyptus grandis
Eucgr.K01474 0.5kb downstream 0.5kb downstream 3447 true Chr11: 18131301-18134747 Eucalyptus grandis
Eucgr.K01474 0.5kb downstream 0.5kb downstream 500 false Chr11: 18134248-18134747 Eucalyptus grandis
Eucgr.K01474 1.0kb upstream 1.0kb upstream 3947 true Chr11: 18130301-18134247 Eucalyptus grandis
Eucgr.K01474 1.0kb upstream 1.0kb upstream 1000 false Chr11: 18130301-18131300 Eucalyptus grandis
Eucgr.K01474 1.0kb downstream 1.0kb downstream 3947 true Chr11: 18131301-18135247 Eucalyptus grandis
Eucgr.K01474 1.0kb downstream 1.0kb downstream 1000 false Chr11: 18134248-18135247 Eucalyptus grandis
Eucgr.K01474 2.0kb upstream 2.0kb upstream 4947 true Chr11: 18129301-18134247 Eucalyptus grandis
Eucgr.K01474 2.0kb upstream 2.0kb upstream 2000 false Chr11: 18129301-18131300 Eucalyptus grandis
Eucgr.K01474 2.0kb downstream 2.0kb downstream 4947 true Chr11: 18131301-18136247 Eucalyptus grandis
Eucgr.K01474 2.0kb downstream 2.0kb downstream 2000 false Chr11: 18134248-18136247 Eucalyptus grandis
Eucgr.K01474 5.0kb upstream 5.0kb upstream 7947 true Chr11: 18126301-18134247 Eucalyptus grandis
Eucgr.K01474 5.0kb upstream 5.0kb upstream 5000 false Chr11: 18126301-18131300 Eucalyptus grandis
Eucgr.K01474 5.0kb downstream 5.0kb downstream 7947 true Chr11: 18131301-18139247 Eucalyptus grandis
Eucgr.K01474 5.0kb downstream 5.0kb downstream 5000 false Chr11: 18134248-18139247 Eucalyptus grandis
Eucgr.K01474 10.0kb upstream 10.0kb upstream 12947 true Chr11: 18121301-18134247 Eucalyptus grandis
Eucgr.K01474 10.0kb upstream 10.0kb upstream 10000 false Chr11: 18121301-18131300 Eucalyptus grandis
Eucgr.K01474 10.0kb downstream 10.0kb downstream 12947 true Chr11: 18131301-18144247 Eucalyptus grandis
Eucgr.K01474 10.0kb downstream 10.0kb downstream 10000 false Chr11: 18134248-18144247 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067086 5270 Rosid View MSA
123745414 5271 Pentapetalae View MSA
122792337 5272 Eudicot View MSA
122048222 5273 Angiosperm View MSA
121347781 5274 Embryophyte View MSA
123427936 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.15039 0.0 8.29667    
cufflinks 1.02366 0.0 3.02926   Low
cufflinks 3.02322 0.0 8.01811    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.63351 0.0 22.7061   High

0 Strain