Gene : Eucgr.K01417 E. grandis v2.0
Defline:  (1 of 2) PTHR11999:SF70 - AROMATIC-L-AMINO-ACID DECARBOXYLASE Genomic Order:  1189
Name:  ? Eucgr.K01417 Secondary Identifier:  ? PAC:32069452
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6802 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01417 0.5kb upstream 0.5kb upstream 9125 true Chr11: 17519906-17529030 Eucalyptus grandis
Eucgr.K01417 0.5kb upstream 0.5kb upstream 500 false Chr11: 17519906-17520405 Eucalyptus grandis
Eucgr.K01417 0.5kb downstream 0.5kb downstream 9125 true Chr11: 17520406-17529530 Eucalyptus grandis
Eucgr.K01417 0.5kb downstream 0.5kb downstream 500 false Chr11: 17529031-17529530 Eucalyptus grandis
Eucgr.K01417 1.0kb upstream 1.0kb upstream 9625 true Chr11: 17519406-17529030 Eucalyptus grandis
Eucgr.K01417 1.0kb upstream 1.0kb upstream 1000 false Chr11: 17519406-17520405 Eucalyptus grandis
Eucgr.K01417 1.0kb downstream 1.0kb downstream 9625 true Chr11: 17520406-17530030 Eucalyptus grandis
Eucgr.K01417 1.0kb downstream 1.0kb downstream 1000 false Chr11: 17529031-17530030 Eucalyptus grandis
Eucgr.K01417 2.0kb upstream 2.0kb upstream 10625 true Chr11: 17518406-17529030 Eucalyptus grandis
Eucgr.K01417 2.0kb upstream 2.0kb upstream 2000 false Chr11: 17518406-17520405 Eucalyptus grandis
Eucgr.K01417 2.0kb downstream 2.0kb downstream 10625 true Chr11: 17520406-17531030 Eucalyptus grandis
Eucgr.K01417 2.0kb downstream 2.0kb downstream 2000 false Chr11: 17529031-17531030 Eucalyptus grandis
Eucgr.K01417 5.0kb upstream 5.0kb upstream 13625 true Chr11: 17515406-17529030 Eucalyptus grandis
Eucgr.K01417 5.0kb upstream 5.0kb upstream 5000 false Chr11: 17515406-17520405 Eucalyptus grandis
Eucgr.K01417 5.0kb downstream 5.0kb downstream 13625 true Chr11: 17520406-17534030 Eucalyptus grandis
Eucgr.K01417 5.0kb downstream 5.0kb downstream 5000 false Chr11: 17529031-17534030 Eucalyptus grandis
Eucgr.K01417 10.0kb upstream 10.0kb upstream 18625 true Chr11: 17510406-17529030 Eucalyptus grandis
Eucgr.K01417 10.0kb upstream 10.0kb upstream 10000 false Chr11: 17510406-17520405 Eucalyptus grandis
Eucgr.K01417 10.0kb downstream 10.0kb downstream 18625 true Chr11: 17520406-17539030 Eucalyptus grandis
Eucgr.K01417 10.0kb downstream 10.0kb downstream 10000 false Chr11: 17529031-17539030 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063547 5270 Rosid View MSA
123753365 5271 Pentapetalae View MSA
122794689 5272 Eudicot View MSA
122049990 5273 Angiosperm View MSA
121346874 5274 Embryophyte View MSA
123423954 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.041279 0.0 0.253329 Low Low
cufflinks 0.202973 0.0 0.751945 Low  
cufflinks 0.366921 0.0 1.2349 Low  
cufflinks 0.0898058 0.0 0.406671 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.29329 0.0 1.04602 Low  

0 Strain