Gene : Eucgr.K02277 E. grandis v2.0
Defline:  (1 of 1) PTHR15454 - NISCHARIN RELATED Genomic Order:  1912
Name:  ? Eucgr.K02277 Secondary Identifier:  ? PAC:32068948
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02277 0.5kb upstream 0.5kb upstream 8828 true Chr11: 30612923-30621750 Eucalyptus grandis
Eucgr.K02277 0.5kb upstream 0.5kb upstream 500 false Chr11: 30612923-30613422 Eucalyptus grandis
Eucgr.K02277 0.5kb downstream 0.5kb downstream 8828 true Chr11: 30613423-30622250 Eucalyptus grandis
Eucgr.K02277 0.5kb downstream 0.5kb downstream 500 false Chr11: 30621751-30622250 Eucalyptus grandis
Eucgr.K02277 1.0kb upstream 1.0kb upstream 9328 true Chr11: 30612423-30621750 Eucalyptus grandis
Eucgr.K02277 1.0kb upstream 1.0kb upstream 1000 false Chr11: 30612423-30613422 Eucalyptus grandis
Eucgr.K02277 1.0kb downstream 1.0kb downstream 9328 true Chr11: 30613423-30622750 Eucalyptus grandis
Eucgr.K02277 1.0kb downstream 1.0kb downstream 1000 false Chr11: 30621751-30622750 Eucalyptus grandis
Eucgr.K02277 2.0kb upstream 2.0kb upstream 10328 true Chr11: 30611423-30621750 Eucalyptus grandis
Eucgr.K02277 2.0kb upstream 2.0kb upstream 2000 false Chr11: 30611423-30613422 Eucalyptus grandis
Eucgr.K02277 2.0kb downstream 2.0kb downstream 10328 true Chr11: 30613423-30623750 Eucalyptus grandis
Eucgr.K02277 2.0kb downstream 2.0kb downstream 2000 false Chr11: 30621751-30623750 Eucalyptus grandis
Eucgr.K02277 5.0kb upstream 5.0kb upstream 13328 true Chr11: 30608423-30621750 Eucalyptus grandis
Eucgr.K02277 5.0kb upstream 5.0kb upstream 5000 false Chr11: 30608423-30613422 Eucalyptus grandis
Eucgr.K02277 5.0kb downstream 5.0kb downstream 13328 true Chr11: 30613423-30626750 Eucalyptus grandis
Eucgr.K02277 5.0kb downstream 5.0kb downstream 5000 false Chr11: 30621751-30626750 Eucalyptus grandis
Eucgr.K02277 10.0kb upstream 10.0kb upstream 18328 true Chr11: 30603423-30621750 Eucalyptus grandis
Eucgr.K02277 10.0kb upstream 10.0kb upstream 10000 false Chr11: 30603423-30613422 Eucalyptus grandis
Eucgr.K02277 10.0kb downstream 10.0kb downstream 18328 true Chr11: 30613423-30631750 Eucalyptus grandis
Eucgr.K02277 10.0kb downstream 10.0kb downstream 10000 false Chr11: 30621751-30631750 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068979 5270 Rosid View MSA
123746713 5271 Pentapetalae View MSA
122789922 5272 Eudicot View MSA
122043032 5273 Angiosperm View MSA
121348804 5274 Embryophyte View MSA
123427587 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.66237 0.0 12.862   Low
cufflinks 19.1746 0.0 42.5666   High
cufflinks 5.66643 0.0 12.8421   Low
cufflinks 17.5673 0.0 38.9542    
cufflinks 14.578 0.0 32.242    
cufflinks 8.59362 0.0 19.1721    

0 Strain