Gene : Eucgr.K02266 E. grandis v2.0
Defline:  (1 of 1) PTHR10516:SF308 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-2, CHLOROPLASTIC-RELATED Genomic Order:  1901
Name:  ? Eucgr.K02266 Secondary Identifier:  ? PAC:32068215
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02266 0.5kb upstream 0.5kb upstream 2289 true Chr11: 30553283-30555571 Eucalyptus grandis
Eucgr.K02266 0.5kb upstream 0.5kb upstream 500 false Chr11: 30553283-30553782 Eucalyptus grandis
Eucgr.K02266 0.5kb downstream 0.5kb downstream 2289 true Chr11: 30553783-30556071 Eucalyptus grandis
Eucgr.K02266 0.5kb downstream 0.5kb downstream 500 false Chr11: 30555572-30556071 Eucalyptus grandis
Eucgr.K02266 1.0kb upstream 1.0kb upstream 2789 true Chr11: 30552783-30555571 Eucalyptus grandis
Eucgr.K02266 1.0kb upstream 1.0kb upstream 1000 false Chr11: 30552783-30553782 Eucalyptus grandis
Eucgr.K02266 1.0kb downstream 1.0kb downstream 2789 true Chr11: 30553783-30556571 Eucalyptus grandis
Eucgr.K02266 1.0kb downstream 1.0kb downstream 1000 false Chr11: 30555572-30556571 Eucalyptus grandis
Eucgr.K02266 2.0kb upstream 2.0kb upstream 3789 true Chr11: 30551783-30555571 Eucalyptus grandis
Eucgr.K02266 2.0kb upstream 2.0kb upstream 2000 false Chr11: 30551783-30553782 Eucalyptus grandis
Eucgr.K02266 2.0kb downstream 2.0kb downstream 3789 true Chr11: 30553783-30557571 Eucalyptus grandis
Eucgr.K02266 2.0kb downstream 2.0kb downstream 2000 false Chr11: 30555572-30557571 Eucalyptus grandis
Eucgr.K02266 5.0kb upstream 5.0kb upstream 6789 true Chr11: 30548783-30555571 Eucalyptus grandis
Eucgr.K02266 5.0kb upstream 5.0kb upstream 5000 false Chr11: 30548783-30553782 Eucalyptus grandis
Eucgr.K02266 5.0kb downstream 5.0kb downstream 6789 true Chr11: 30553783-30560571 Eucalyptus grandis
Eucgr.K02266 5.0kb downstream 5.0kb downstream 5000 false Chr11: 30555572-30560571 Eucalyptus grandis
Eucgr.K02266 10.0kb upstream 10.0kb upstream 11789 true Chr11: 30543783-30555571 Eucalyptus grandis
Eucgr.K02266 10.0kb upstream 10.0kb upstream 10000 false Chr11: 30543783-30553782 Eucalyptus grandis
Eucgr.K02266 10.0kb downstream 10.0kb downstream 11789 true Chr11: 30553783-30565571 Eucalyptus grandis
Eucgr.K02266 10.0kb downstream 10.0kb downstream 10000 false Chr11: 30555572-30565571 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041293 5273 Angiosperm View MSA
124068387 5270 Rosid View MSA
123740147 5271 Pentapetalae View MSA
122793412 5272 Eudicot View MSA
121344596 5274 Embryophyte View MSA
123424769 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.6902 0.0 25.6151    
cufflinks 0.6902 0.0 2.22207 Low Low
cufflinks 6.386 0.0 16.1592    
cufflinks 1.03615 0.0 3.15963    
cufflinks 3.33142 0.0 8.99682    
cufflinks 91.8276 0.0 205.475 High High

0 Strain