Gene : Eucgr.K02272 E. grandis v2.0
Defline:  (1 of 2) PTHR23180:SF290 - C2 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1907
Name:  ? Eucgr.K02272 Secondary Identifier:  ? PAC:32066669
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02272 0.5kb upstream 0.5kb upstream 2807 true Chr11: 30585494-30588300 Eucalyptus grandis
Eucgr.K02272 0.5kb upstream 0.5kb upstream 500 false Chr11: 30587801-30588300 Eucalyptus grandis
Eucgr.K02272 0.5kb downstream 0.5kb downstream 2807 true Chr11: 30584994-30587800 Eucalyptus grandis
Eucgr.K02272 0.5kb downstream 0.5kb downstream 500 false Chr11: 30584994-30585493 Eucalyptus grandis
Eucgr.K02272 1.0kb upstream 1.0kb upstream 3307 true Chr11: 30585494-30588800 Eucalyptus grandis
Eucgr.K02272 1.0kb upstream 1.0kb upstream 1000 false Chr11: 30587801-30588800 Eucalyptus grandis
Eucgr.K02272 1.0kb downstream 1.0kb downstream 3307 true Chr11: 30584494-30587800 Eucalyptus grandis
Eucgr.K02272 1.0kb downstream 1.0kb downstream 1000 false Chr11: 30584494-30585493 Eucalyptus grandis
Eucgr.K02272 2.0kb upstream 2.0kb upstream 4307 true Chr11: 30585494-30589800 Eucalyptus grandis
Eucgr.K02272 2.0kb upstream 2.0kb upstream 2000 false Chr11: 30587801-30589800 Eucalyptus grandis
Eucgr.K02272 2.0kb downstream 2.0kb downstream 4307 true Chr11: 30583494-30587800 Eucalyptus grandis
Eucgr.K02272 2.0kb downstream 2.0kb downstream 2000 false Chr11: 30583494-30585493 Eucalyptus grandis
Eucgr.K02272 5.0kb upstream 5.0kb upstream 7307 true Chr11: 30585494-30592800 Eucalyptus grandis
Eucgr.K02272 5.0kb upstream 5.0kb upstream 5000 false Chr11: 30587801-30592800 Eucalyptus grandis
Eucgr.K02272 5.0kb downstream 5.0kb downstream 7307 true Chr11: 30580494-30587800 Eucalyptus grandis
Eucgr.K02272 5.0kb downstream 5.0kb downstream 5000 false Chr11: 30580494-30585493 Eucalyptus grandis
Eucgr.K02272 10.0kb upstream 10.0kb upstream 12307 true Chr11: 30585494-30597800 Eucalyptus grandis
Eucgr.K02272 10.0kb upstream 10.0kb upstream 10000 false Chr11: 30587801-30597800 Eucalyptus grandis
Eucgr.K02272 10.0kb downstream 10.0kb downstream 12307 true Chr11: 30575494-30587800 Eucalyptus grandis
Eucgr.K02272 10.0kb downstream 10.0kb downstream 10000 false Chr11: 30575494-30585493 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069795 5270 Rosid View MSA
123747243 5271 Pentapetalae View MSA
122796022 5272 Eudicot View MSA
122048793 5273 Angiosperm View MSA
121311115 5274 Embryophyte View MSA
123348457 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.533688 0.0 1.80673 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain