Gene : Eucgr.K02244 E. grandis v2.0
Defline:  (1 of 1) 3.6.4.9 - Chaperonin ATPase / Chaperonin Genomic Order:  1880
Name:  ? Eucgr.K02244 Secondary Identifier:  ? PAC:32068747
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02244 0.5kb upstream 0.5kb upstream 2421 true Chr11: 30352428-30354848 Eucalyptus grandis
Eucgr.K02244 0.5kb upstream 0.5kb upstream 500 false Chr11: 30354349-30354848 Eucalyptus grandis
Eucgr.K02244 0.5kb downstream 0.5kb downstream 2421 true Chr11: 30351928-30354348 Eucalyptus grandis
Eucgr.K02244 0.5kb downstream 0.5kb downstream 500 false Chr11: 30351928-30352427 Eucalyptus grandis
Eucgr.K02244 1.0kb upstream 1.0kb upstream 2921 true Chr11: 30352428-30355348 Eucalyptus grandis
Eucgr.K02244 1.0kb upstream 1.0kb upstream 1000 false Chr11: 30354349-30355348 Eucalyptus grandis
Eucgr.K02244 1.0kb downstream 1.0kb downstream 2921 true Chr11: 30351428-30354348 Eucalyptus grandis
Eucgr.K02244 1.0kb downstream 1.0kb downstream 1000 false Chr11: 30351428-30352427 Eucalyptus grandis
Eucgr.K02244 2.0kb upstream 2.0kb upstream 3921 true Chr11: 30352428-30356348 Eucalyptus grandis
Eucgr.K02244 2.0kb upstream 2.0kb upstream 2000 false Chr11: 30354349-30356348 Eucalyptus grandis
Eucgr.K02244 2.0kb downstream 2.0kb downstream 3921 true Chr11: 30350428-30354348 Eucalyptus grandis
Eucgr.K02244 2.0kb downstream 2.0kb downstream 2000 false Chr11: 30350428-30352427 Eucalyptus grandis
Eucgr.K02244 5.0kb upstream 5.0kb upstream 6921 true Chr11: 30352428-30359348 Eucalyptus grandis
Eucgr.K02244 5.0kb upstream 5.0kb upstream 5000 false Chr11: 30354349-30359348 Eucalyptus grandis
Eucgr.K02244 5.0kb downstream 5.0kb downstream 6921 true Chr11: 30347428-30354348 Eucalyptus grandis
Eucgr.K02244 5.0kb downstream 5.0kb downstream 5000 false Chr11: 30347428-30352427 Eucalyptus grandis
Eucgr.K02244 10.0kb upstream 10.0kb upstream 11921 true Chr11: 30352428-30364348 Eucalyptus grandis
Eucgr.K02244 10.0kb upstream 10.0kb upstream 10000 false Chr11: 30354349-30364348 Eucalyptus grandis
Eucgr.K02244 10.0kb downstream 10.0kb downstream 11921 true Chr11: 30342428-30354348 Eucalyptus grandis
Eucgr.K02244 10.0kb downstream 10.0kb downstream 10000 false Chr11: 30342428-30352427 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041248 5273 Angiosperm View MSA
124061732 5270 Rosid View MSA
123744760 5271 Pentapetalae View MSA
122793416 5272 Eudicot View MSA
121345664 5274 Embryophyte View MSA
123424288 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.5354 0.0 94.6208 High  
cufflinks 58.1233 0.0 130.967 High  
cufflinks 43.7785 0.0 97.5214 High  
cufflinks 75.9556 0.0 174.131 High  
cufflinks 84.9804 0.0 195.408 High High
cufflinks 33.0131 0.0 73.0808   Low

0 Strain