Gene : Eucgr.K02223 E. grandis v2.0
Defline:  (1 of 5) 4.1.1.39 - Ribulose-bisphosphate carboxylase / RuBP carboxylase Genomic Order:  1860
Name:  ? Eucgr.K02223 Secondary Identifier:  ? PAC:32068225
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis CALVIN-PWY Eucalyptus grandis pathologic  
Egrandis PHOTOALL-PWY Eucalyptus grandis pathologic  
Egrandis PWY-5723 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02223 0.5kb upstream 0.5kb upstream 2093 true Chr11: 30200836-30202928 Eucalyptus grandis
Eucgr.K02223 0.5kb upstream 0.5kb upstream 500 false Chr11: 30200836-30201335 Eucalyptus grandis
Eucgr.K02223 0.5kb downstream 0.5kb downstream 2093 true Chr11: 30201336-30203428 Eucalyptus grandis
Eucgr.K02223 0.5kb downstream 0.5kb downstream 500 false Chr11: 30202929-30203428 Eucalyptus grandis
Eucgr.K02223 1.0kb upstream 1.0kb upstream 2593 true Chr11: 30200336-30202928 Eucalyptus grandis
Eucgr.K02223 1.0kb upstream 1.0kb upstream 1000 false Chr11: 30200336-30201335 Eucalyptus grandis
Eucgr.K02223 1.0kb downstream 1.0kb downstream 2593 true Chr11: 30201336-30203928 Eucalyptus grandis
Eucgr.K02223 1.0kb downstream 1.0kb downstream 1000 false Chr11: 30202929-30203928 Eucalyptus grandis
Eucgr.K02223 2.0kb upstream 2.0kb upstream 3593 true Chr11: 30199336-30202928 Eucalyptus grandis
Eucgr.K02223 2.0kb upstream 2.0kb upstream 2000 false Chr11: 30199336-30201335 Eucalyptus grandis
Eucgr.K02223 2.0kb downstream 2.0kb downstream 3593 true Chr11: 30201336-30204928 Eucalyptus grandis
Eucgr.K02223 2.0kb downstream 2.0kb downstream 2000 false Chr11: 30202929-30204928 Eucalyptus grandis
Eucgr.K02223 5.0kb upstream 5.0kb upstream 6593 true Chr11: 30196336-30202928 Eucalyptus grandis
Eucgr.K02223 5.0kb upstream 5.0kb upstream 5000 false Chr11: 30196336-30201335 Eucalyptus grandis
Eucgr.K02223 5.0kb downstream 5.0kb downstream 6593 true Chr11: 30201336-30207928 Eucalyptus grandis
Eucgr.K02223 5.0kb downstream 5.0kb downstream 5000 false Chr11: 30202929-30207928 Eucalyptus grandis
Eucgr.K02223 10.0kb upstream 10.0kb upstream 11593 true Chr11: 30191336-30202928 Eucalyptus grandis
Eucgr.K02223 10.0kb upstream 10.0kb upstream 10000 false Chr11: 30191336-30201335 Eucalyptus grandis
Eucgr.K02223 10.0kb downstream 10.0kb downstream 11593 true Chr11: 30201336-30212928 Eucalyptus grandis
Eucgr.K02223 10.0kb downstream 10.0kb downstream 10000 false Chr11: 30202929-30212928 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066802 5270 Rosid View MSA
123747186 5271 Pentapetalae View MSA
122796864 5272 Eudicot View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 63.2962 0.0 140.22 High  
cufflinks 1.85313 0.0 5.24833    
cufflinks 24.928 0.0 55.971    
cufflinks 0.191356 0.0 0.720977 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 154.694 0.0 356.91 High High

0 Strain