Gene : Eucgr.K02190 E. grandis v2.0
Defline:  (1 of 1) PTHR17130//PTHR17130:SF25 - MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25 Genomic Order:  1829
Name:  ? Eucgr.K02190 Secondary Identifier:  ? PAC:32066519
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02190 0.5kb upstream 0.5kb upstream 1974 true Chr11: 29868261-29870234 Eucalyptus grandis
Eucgr.K02190 0.5kb upstream 0.5kb upstream 500 false Chr11: 29869735-29870234 Eucalyptus grandis
Eucgr.K02190 0.5kb downstream 0.5kb downstream 1974 true Chr11: 29867761-29869734 Eucalyptus grandis
Eucgr.K02190 0.5kb downstream 0.5kb downstream 500 false Chr11: 29867761-29868260 Eucalyptus grandis
Eucgr.K02190 1.0kb upstream 1.0kb upstream 2474 true Chr11: 29868261-29870734 Eucalyptus grandis
Eucgr.K02190 1.0kb upstream 1.0kb upstream 1000 false Chr11: 29869735-29870734 Eucalyptus grandis
Eucgr.K02190 1.0kb downstream 1.0kb downstream 2474 true Chr11: 29867261-29869734 Eucalyptus grandis
Eucgr.K02190 1.0kb downstream 1.0kb downstream 1000 false Chr11: 29867261-29868260 Eucalyptus grandis
Eucgr.K02190 2.0kb upstream 2.0kb upstream 3474 true Chr11: 29868261-29871734 Eucalyptus grandis
Eucgr.K02190 2.0kb upstream 2.0kb upstream 2000 false Chr11: 29869735-29871734 Eucalyptus grandis
Eucgr.K02190 2.0kb downstream 2.0kb downstream 3474 true Chr11: 29866261-29869734 Eucalyptus grandis
Eucgr.K02190 2.0kb downstream 2.0kb downstream 2000 false Chr11: 29866261-29868260 Eucalyptus grandis
Eucgr.K02190 5.0kb upstream 5.0kb upstream 6474 true Chr11: 29868261-29874734 Eucalyptus grandis
Eucgr.K02190 5.0kb upstream 5.0kb upstream 5000 false Chr11: 29869735-29874734 Eucalyptus grandis
Eucgr.K02190 5.0kb downstream 5.0kb downstream 6474 true Chr11: 29863261-29869734 Eucalyptus grandis
Eucgr.K02190 5.0kb downstream 5.0kb downstream 5000 false Chr11: 29863261-29868260 Eucalyptus grandis
Eucgr.K02190 10.0kb upstream 10.0kb upstream 11474 true Chr11: 29868261-29879734 Eucalyptus grandis
Eucgr.K02190 10.0kb upstream 10.0kb upstream 10000 false Chr11: 29869735-29879734 Eucalyptus grandis
Eucgr.K02190 10.0kb downstream 10.0kb downstream 11474 true Chr11: 29858261-29869734 Eucalyptus grandis
Eucgr.K02190 10.0kb downstream 10.0kb downstream 10000 false Chr11: 29858261-29868260 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067897 5270 Rosid View MSA
123746981 5271 Pentapetalae View MSA
122786160 5272 Eudicot View MSA
122045376 5273 Angiosperm View MSA
121346766 5274 Embryophyte View MSA
123425626 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.1326 0.0 72.6293 High  
cufflinks 4.28598 0.0 12.1385   Low
cufflinks 27.0195 0.0 64.001 High  
cufflinks 8.21507 0.0 21.8707    
cufflinks 14.9941 0.0 37.5552    
cufflinks 67.6028 0.0 150.429 High High

0 Strain