Gene : Eucgr.K02197 E. grandis v2.0
Defline:  (1 of 2) PTHR31384:SF8 - AUXIN RESPONSE FACTOR 2 Genomic Order:  1836
Name:  ? Eucgr.K02197 Secondary Identifier:  ? PAC:32067704
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02197 0.5kb upstream 0.5kb upstream 8031 true Chr11: 29940074-29948104 Eucalyptus grandis
Eucgr.K02197 0.5kb upstream 0.5kb upstream 500 false Chr11: 29940074-29940573 Eucalyptus grandis
Eucgr.K02197 0.5kb downstream 0.5kb downstream 8031 true Chr11: 29940574-29948604 Eucalyptus grandis
Eucgr.K02197 0.5kb downstream 0.5kb downstream 500 false Chr11: 29948105-29948604 Eucalyptus grandis
Eucgr.K02197 1.0kb upstream 1.0kb upstream 8531 true Chr11: 29939574-29948104 Eucalyptus grandis
Eucgr.K02197 1.0kb upstream 1.0kb upstream 1000 false Chr11: 29939574-29940573 Eucalyptus grandis
Eucgr.K02197 1.0kb downstream 1.0kb downstream 8531 true Chr11: 29940574-29949104 Eucalyptus grandis
Eucgr.K02197 1.0kb downstream 1.0kb downstream 1000 false Chr11: 29948105-29949104 Eucalyptus grandis
Eucgr.K02197 2.0kb upstream 2.0kb upstream 9531 true Chr11: 29938574-29948104 Eucalyptus grandis
Eucgr.K02197 2.0kb upstream 2.0kb upstream 2000 false Chr11: 29938574-29940573 Eucalyptus grandis
Eucgr.K02197 2.0kb downstream 2.0kb downstream 9531 true Chr11: 29940574-29950104 Eucalyptus grandis
Eucgr.K02197 2.0kb downstream 2.0kb downstream 2000 false Chr11: 29948105-29950104 Eucalyptus grandis
Eucgr.K02197 5.0kb upstream 5.0kb upstream 12531 true Chr11: 29935574-29948104 Eucalyptus grandis
Eucgr.K02197 5.0kb upstream 5.0kb upstream 5000 false Chr11: 29935574-29940573 Eucalyptus grandis
Eucgr.K02197 5.0kb downstream 5.0kb downstream 12531 true Chr11: 29940574-29953104 Eucalyptus grandis
Eucgr.K02197 5.0kb downstream 5.0kb downstream 5000 false Chr11: 29948105-29953104 Eucalyptus grandis
Eucgr.K02197 10.0kb upstream 10.0kb upstream 17531 true Chr11: 29930574-29948104 Eucalyptus grandis
Eucgr.K02197 10.0kb upstream 10.0kb upstream 10000 false Chr11: 29930574-29940573 Eucalyptus grandis
Eucgr.K02197 10.0kb downstream 10.0kb downstream 17531 true Chr11: 29940574-29958104 Eucalyptus grandis
Eucgr.K02197 10.0kb downstream 10.0kb downstream 10000 false Chr11: 29948105-29958104 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074204 5270 Rosid View MSA
123738265 5271 Pentapetalae View MSA
122792462 5272 Eudicot View MSA
122051461 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 60.5706 0.0 206.319 High  
cufflinks 46.2826 0.0 126.311 High  
cufflinks 47.1176 0.0 138.534 High  
cufflinks 22.4344 0.0 58.7532   Low
cufflinks 23.9991 0.0 58.0408   Low
cufflinks 55.1288 0.0 148.114 High  

0 Strain