Gene : Eucgr.K02168 E. grandis v2.0
Defline:  (1 of 8) PF03909 - BSD domain (BSD) Genomic Order:  1809
Name:  ? Eucgr.K02168 Secondary Identifier:  ? PAC:32066814
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02168 0.5kb upstream 0.5kb upstream 2900 true Chr11: 29559034-29561933 Eucalyptus grandis
Eucgr.K02168 0.5kb upstream 0.5kb upstream 500 false Chr11: 29559034-29559533 Eucalyptus grandis
Eucgr.K02168 0.5kb downstream 0.5kb downstream 2900 true Chr11: 29559534-29562433 Eucalyptus grandis
Eucgr.K02168 0.5kb downstream 0.5kb downstream 500 false Chr11: 29561934-29562433 Eucalyptus grandis
Eucgr.K02168 1.0kb upstream 1.0kb upstream 3400 true Chr11: 29558534-29561933 Eucalyptus grandis
Eucgr.K02168 1.0kb upstream 1.0kb upstream 1000 false Chr11: 29558534-29559533 Eucalyptus grandis
Eucgr.K02168 1.0kb downstream 1.0kb downstream 3400 true Chr11: 29559534-29562933 Eucalyptus grandis
Eucgr.K02168 1.0kb downstream 1.0kb downstream 1000 false Chr11: 29561934-29562933 Eucalyptus grandis
Eucgr.K02168 2.0kb upstream 2.0kb upstream 4400 true Chr11: 29557534-29561933 Eucalyptus grandis
Eucgr.K02168 2.0kb upstream 2.0kb upstream 2000 false Chr11: 29557534-29559533 Eucalyptus grandis
Eucgr.K02168 2.0kb downstream 2.0kb downstream 4400 true Chr11: 29559534-29563933 Eucalyptus grandis
Eucgr.K02168 2.0kb downstream 2.0kb downstream 2000 false Chr11: 29561934-29563933 Eucalyptus grandis
Eucgr.K02168 5.0kb upstream 5.0kb upstream 7400 true Chr11: 29554534-29561933 Eucalyptus grandis
Eucgr.K02168 5.0kb upstream 5.0kb upstream 5000 false Chr11: 29554534-29559533 Eucalyptus grandis
Eucgr.K02168 5.0kb downstream 5.0kb downstream 7400 true Chr11: 29559534-29566933 Eucalyptus grandis
Eucgr.K02168 5.0kb downstream 5.0kb downstream 5000 false Chr11: 29561934-29566933 Eucalyptus grandis
Eucgr.K02168 10.0kb upstream 10.0kb upstream 12400 true Chr11: 29549534-29561933 Eucalyptus grandis
Eucgr.K02168 10.0kb upstream 10.0kb upstream 10000 false Chr11: 29549534-29559533 Eucalyptus grandis
Eucgr.K02168 10.0kb downstream 10.0kb downstream 12400 true Chr11: 29559534-29571933 Eucalyptus grandis
Eucgr.K02168 10.0kb downstream 10.0kb downstream 10000 false Chr11: 29561934-29571933 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061374 5270 Rosid View MSA
123737420 5271 Pentapetalae View MSA
122787609 5272 Eudicot View MSA
122050169 5273 Angiosperm View MSA
121311775 5274 Embryophyte View MSA
123349027 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.02294 0.0 21.3575    
cufflinks 8.47856 0.0 22.4035    
cufflinks 8.38872 0.0 22.4374    
cufflinks 4.82363 0.0 13.6213    
cufflinks 3.00072 0.0 8.85225   Low
cufflinks 3.29245 0.0 9.7344   Low

0 Strain