Gene : Eucgr.K02171 E. grandis v2.0
Defline:  (1 of 3) PTHR15898:SF1 - GLUCOSE-INDUCED DEGRADATION PROTEIN 4 HOMOLOG Genomic Order:  1812
Name:  ? Eucgr.K02171 Secondary Identifier:  ? PAC:32068582
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02171 0.5kb upstream 0.5kb upstream 4118 true Chr11: 29576919-29581036 Eucalyptus grandis
Eucgr.K02171 0.5kb upstream 0.5kb upstream 500 false Chr11: 29580537-29581036 Eucalyptus grandis
Eucgr.K02171 0.5kb downstream 0.5kb downstream 4118 true Chr11: 29576419-29580536 Eucalyptus grandis
Eucgr.K02171 0.5kb downstream 0.5kb downstream 500 false Chr11: 29576419-29576918 Eucalyptus grandis
Eucgr.K02171 1.0kb upstream 1.0kb upstream 4618 true Chr11: 29576919-29581536 Eucalyptus grandis
Eucgr.K02171 1.0kb upstream 1.0kb upstream 1000 false Chr11: 29580537-29581536 Eucalyptus grandis
Eucgr.K02171 1.0kb downstream 1.0kb downstream 4618 true Chr11: 29575919-29580536 Eucalyptus grandis
Eucgr.K02171 1.0kb downstream 1.0kb downstream 1000 false Chr11: 29575919-29576918 Eucalyptus grandis
Eucgr.K02171 2.0kb upstream 2.0kb upstream 5618 true Chr11: 29576919-29582536 Eucalyptus grandis
Eucgr.K02171 2.0kb upstream 2.0kb upstream 2000 false Chr11: 29580537-29582536 Eucalyptus grandis
Eucgr.K02171 2.0kb downstream 2.0kb downstream 5618 true Chr11: 29574919-29580536 Eucalyptus grandis
Eucgr.K02171 2.0kb downstream 2.0kb downstream 2000 false Chr11: 29574919-29576918 Eucalyptus grandis
Eucgr.K02171 5.0kb upstream 5.0kb upstream 8618 true Chr11: 29576919-29585536 Eucalyptus grandis
Eucgr.K02171 5.0kb upstream 5.0kb upstream 5000 false Chr11: 29580537-29585536 Eucalyptus grandis
Eucgr.K02171 5.0kb downstream 5.0kb downstream 8618 true Chr11: 29571919-29580536 Eucalyptus grandis
Eucgr.K02171 5.0kb downstream 5.0kb downstream 5000 false Chr11: 29571919-29576918 Eucalyptus grandis
Eucgr.K02171 10.0kb upstream 10.0kb upstream 13618 true Chr11: 29576919-29590536 Eucalyptus grandis
Eucgr.K02171 10.0kb upstream 10.0kb upstream 10000 false Chr11: 29580537-29590536 Eucalyptus grandis
Eucgr.K02171 10.0kb downstream 10.0kb downstream 13618 true Chr11: 29566919-29580536 Eucalyptus grandis
Eucgr.K02171 10.0kb downstream 10.0kb downstream 10000 false Chr11: 29566919-29576918 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060763 5270 Rosid View MSA
123743131 5271 Pentapetalae View MSA
122792219 5272 Eudicot View MSA
122046771 5273 Angiosperm View MSA
121351616 5274 Embryophyte View MSA
123427773 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.37125 0.0 10.9102    
cufflinks 6.29788 0.0 18.9922    
cufflinks 6.67337 0.0 17.9922    
cufflinks 12.4664 0.0 32.0446   High
cufflinks 2.11254 0.0 5.90549   Low
cufflinks 5.91027 0.0 14.1776    

0 Strain