Gene : Eucgr.K02165 E. grandis v2.0
Defline:  (1 of 28) PF03000 - NPH3 family (NPH3) Genomic Order:  1807
Name:  ? Eucgr.K02165 Secondary Identifier:  ? PAC:32069486
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02165 0.5kb upstream 0.5kb upstream 3905 true Chr11: 29517090-29520994 Eucalyptus grandis
Eucgr.K02165 0.5kb upstream 0.5kb upstream 500 false Chr11: 29520495-29520994 Eucalyptus grandis
Eucgr.K02165 0.5kb downstream 0.5kb downstream 3905 true Chr11: 29516590-29520494 Eucalyptus grandis
Eucgr.K02165 0.5kb downstream 0.5kb downstream 500 false Chr11: 29516590-29517089 Eucalyptus grandis
Eucgr.K02165 1.0kb upstream 1.0kb upstream 4405 true Chr11: 29517090-29521494 Eucalyptus grandis
Eucgr.K02165 1.0kb upstream 1.0kb upstream 1000 false Chr11: 29520495-29521494 Eucalyptus grandis
Eucgr.K02165 1.0kb downstream 1.0kb downstream 4405 true Chr11: 29516090-29520494 Eucalyptus grandis
Eucgr.K02165 1.0kb downstream 1.0kb downstream 1000 false Chr11: 29516090-29517089 Eucalyptus grandis
Eucgr.K02165 2.0kb upstream 2.0kb upstream 5405 true Chr11: 29517090-29522494 Eucalyptus grandis
Eucgr.K02165 2.0kb upstream 2.0kb upstream 2000 false Chr11: 29520495-29522494 Eucalyptus grandis
Eucgr.K02165 2.0kb downstream 2.0kb downstream 5405 true Chr11: 29515090-29520494 Eucalyptus grandis
Eucgr.K02165 2.0kb downstream 2.0kb downstream 2000 false Chr11: 29515090-29517089 Eucalyptus grandis
Eucgr.K02165 5.0kb upstream 5.0kb upstream 8405 true Chr11: 29517090-29525494 Eucalyptus grandis
Eucgr.K02165 5.0kb upstream 5.0kb upstream 5000 false Chr11: 29520495-29525494 Eucalyptus grandis
Eucgr.K02165 5.0kb downstream 5.0kb downstream 8405 true Chr11: 29512090-29520494 Eucalyptus grandis
Eucgr.K02165 5.0kb downstream 5.0kb downstream 5000 false Chr11: 29512090-29517089 Eucalyptus grandis
Eucgr.K02165 10.0kb upstream 10.0kb upstream 13405 true Chr11: 29517090-29530494 Eucalyptus grandis
Eucgr.K02165 10.0kb upstream 10.0kb upstream 10000 false Chr11: 29520495-29530494 Eucalyptus grandis
Eucgr.K02165 10.0kb downstream 10.0kb downstream 13405 true Chr11: 29507090-29520494 Eucalyptus grandis
Eucgr.K02165 10.0kb downstream 10.0kb downstream 10000 false Chr11: 29507090-29517089 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065834 5270 Rosid View MSA
123743822 5271 Pentapetalae View MSA
122789563 5272 Eudicot View MSA
122044004 5273 Angiosperm View MSA
121350656 5274 Embryophyte View MSA
123381839 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.04874 0.0 2.94376    
cufflinks 5.68218 0.0 13.4679    
cufflinks 0.923638 0.0 2.62638    
cufflinks 1.37616 0.0 3.75536    
cufflinks 11.6193 0.0 26.1618   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain