Gene : Eucgr.K02175 E. grandis v2.0
Defline:  (1 of 8) PTHR11941:SF43 - DELTA(3,5)-DELTA(2,4)-DIENOYL-COA ISOMERASE, MITOCHONDRIAL Genomic Order:  1816
Name:  ? Eucgr.K02175 Secondary Identifier:  ? PAC:32066679
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02175 0.5kb upstream 0.5kb upstream 2516 true Chr11: 29659609-29662124 Eucalyptus grandis
Eucgr.K02175 0.5kb upstream 0.5kb upstream 500 false Chr11: 29659609-29660108 Eucalyptus grandis
Eucgr.K02175 0.5kb downstream 0.5kb downstream 2516 true Chr11: 29660109-29662624 Eucalyptus grandis
Eucgr.K02175 0.5kb downstream 0.5kb downstream 500 false Chr11: 29662125-29662624 Eucalyptus grandis
Eucgr.K02175 1.0kb upstream 1.0kb upstream 3016 true Chr11: 29659109-29662124 Eucalyptus grandis
Eucgr.K02175 1.0kb upstream 1.0kb upstream 1000 false Chr11: 29659109-29660108 Eucalyptus grandis
Eucgr.K02175 1.0kb downstream 1.0kb downstream 3016 true Chr11: 29660109-29663124 Eucalyptus grandis
Eucgr.K02175 1.0kb downstream 1.0kb downstream 1000 false Chr11: 29662125-29663124 Eucalyptus grandis
Eucgr.K02175 2.0kb upstream 2.0kb upstream 4016 true Chr11: 29658109-29662124 Eucalyptus grandis
Eucgr.K02175 2.0kb upstream 2.0kb upstream 2000 false Chr11: 29658109-29660108 Eucalyptus grandis
Eucgr.K02175 2.0kb downstream 2.0kb downstream 4016 true Chr11: 29660109-29664124 Eucalyptus grandis
Eucgr.K02175 2.0kb downstream 2.0kb downstream 2000 false Chr11: 29662125-29664124 Eucalyptus grandis
Eucgr.K02175 5.0kb upstream 5.0kb upstream 7016 true Chr11: 29655109-29662124 Eucalyptus grandis
Eucgr.K02175 5.0kb upstream 5.0kb upstream 5000 false Chr11: 29655109-29660108 Eucalyptus grandis
Eucgr.K02175 5.0kb downstream 5.0kb downstream 7016 true Chr11: 29660109-29667124 Eucalyptus grandis
Eucgr.K02175 5.0kb downstream 5.0kb downstream 5000 false Chr11: 29662125-29667124 Eucalyptus grandis
Eucgr.K02175 10.0kb upstream 10.0kb upstream 12016 true Chr11: 29650109-29662124 Eucalyptus grandis
Eucgr.K02175 10.0kb upstream 10.0kb upstream 10000 false Chr11: 29650109-29660108 Eucalyptus grandis
Eucgr.K02175 10.0kb downstream 10.0kb downstream 12016 true Chr11: 29660109-29672124 Eucalyptus grandis
Eucgr.K02175 10.0kb downstream 10.0kb downstream 10000 false Chr11: 29662125-29672124 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062067 5270 Rosid View MSA
123740609 5271 Pentapetalae View MSA
122793404 5272 Eudicot View MSA
122044644 5273 Angiosperm View MSA
121346974 5274 Embryophyte View MSA
123427880 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.79211 0.0 10.7352    
cufflinks 1.35879 0.0 4.40416   Low
cufflinks 3.52779 0.0 10.1687    
cufflinks 7.20436 0.0 19.3741   High
cufflinks 4.02179 0.0 11.4588    
cufflinks 3.80123 0.0 10.6174    

0 Strain