Gene : Eucgr.K02181 E. grandis v2.0
Defline:  (1 of 2) KOG3368 - Transport protein particle (TRAPP) complex subunit Genomic Order:  1821
Name:  ? Eucgr.K02181 Secondary Identifier:  ? PAC:32066208
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02181 0.5kb upstream 0.5kb upstream 3174 true Chr11: 29757020-29760193 Eucalyptus grandis
Eucgr.K02181 0.5kb upstream 0.5kb upstream 500 false Chr11: 29757020-29757519 Eucalyptus grandis
Eucgr.K02181 0.5kb downstream 0.5kb downstream 3174 true Chr11: 29757520-29760693 Eucalyptus grandis
Eucgr.K02181 0.5kb downstream 0.5kb downstream 500 false Chr11: 29760194-29760693 Eucalyptus grandis
Eucgr.K02181 1.0kb upstream 1.0kb upstream 3674 true Chr11: 29756520-29760193 Eucalyptus grandis
Eucgr.K02181 1.0kb upstream 1.0kb upstream 1000 false Chr11: 29756520-29757519 Eucalyptus grandis
Eucgr.K02181 1.0kb downstream 1.0kb downstream 3674 true Chr11: 29757520-29761193 Eucalyptus grandis
Eucgr.K02181 1.0kb downstream 1.0kb downstream 1000 false Chr11: 29760194-29761193 Eucalyptus grandis
Eucgr.K02181 2.0kb upstream 2.0kb upstream 4674 true Chr11: 29755520-29760193 Eucalyptus grandis
Eucgr.K02181 2.0kb upstream 2.0kb upstream 2000 false Chr11: 29755520-29757519 Eucalyptus grandis
Eucgr.K02181 2.0kb downstream 2.0kb downstream 4674 true Chr11: 29757520-29762193 Eucalyptus grandis
Eucgr.K02181 2.0kb downstream 2.0kb downstream 2000 false Chr11: 29760194-29762193 Eucalyptus grandis
Eucgr.K02181 5.0kb upstream 5.0kb upstream 7674 true Chr11: 29752520-29760193 Eucalyptus grandis
Eucgr.K02181 5.0kb upstream 5.0kb upstream 5000 false Chr11: 29752520-29757519 Eucalyptus grandis
Eucgr.K02181 5.0kb downstream 5.0kb downstream 7674 true Chr11: 29757520-29765193 Eucalyptus grandis
Eucgr.K02181 5.0kb downstream 5.0kb downstream 5000 false Chr11: 29760194-29765193 Eucalyptus grandis
Eucgr.K02181 10.0kb upstream 10.0kb upstream 12674 true Chr11: 29747520-29760193 Eucalyptus grandis
Eucgr.K02181 10.0kb upstream 10.0kb upstream 10000 false Chr11: 29747520-29757519 Eucalyptus grandis
Eucgr.K02181 10.0kb downstream 10.0kb downstream 12674 true Chr11: 29757520-29770193 Eucalyptus grandis
Eucgr.K02181 10.0kb downstream 10.0kb downstream 10000 false Chr11: 29760194-29770193 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026490 5273 Angiosperm View MSA
124068318 5270 Rosid View MSA
123752439 5271 Pentapetalae View MSA
122794769 5272 Eudicot View MSA
121344291 5274 Embryophyte View MSA
123427363 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0221 0.0 33.8207   Low
cufflinks 65.0741 0.0 182.156 High High
cufflinks 15.495 0.0 45.3053    
cufflinks 39.4176 0.0 102.102 High  
cufflinks 21.2631 0.0 66.9132    
cufflinks 14.0697 0.0 33.371    

0 Strain