Gene : Eucgr.K02132 E. grandis v2.0
Defline:  (1 of 1) PTHR10693:SF23 - NUCLEAR TRANSPORT FACTOR 2 AND RNA RECOGNITION MOTIF DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1779
Name:  ? Eucgr.K02132 Secondary Identifier:  ? PAC:32066247
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02132 0.5kb upstream 0.5kb upstream 4803 true Chr11: 29179437-29184239 Eucalyptus grandis
Eucgr.K02132 0.5kb upstream 0.5kb upstream 500 false Chr11: 29179437-29179936 Eucalyptus grandis
Eucgr.K02132 0.5kb downstream 0.5kb downstream 4803 true Chr11: 29179937-29184739 Eucalyptus grandis
Eucgr.K02132 0.5kb downstream 0.5kb downstream 500 false Chr11: 29184240-29184739 Eucalyptus grandis
Eucgr.K02132 1.0kb upstream 1.0kb upstream 5303 true Chr11: 29178937-29184239 Eucalyptus grandis
Eucgr.K02132 1.0kb upstream 1.0kb upstream 1000 false Chr11: 29178937-29179936 Eucalyptus grandis
Eucgr.K02132 1.0kb downstream 1.0kb downstream 5303 true Chr11: 29179937-29185239 Eucalyptus grandis
Eucgr.K02132 1.0kb downstream 1.0kb downstream 1000 false Chr11: 29184240-29185239 Eucalyptus grandis
Eucgr.K02132 2.0kb upstream 2.0kb upstream 6303 true Chr11: 29177937-29184239 Eucalyptus grandis
Eucgr.K02132 2.0kb upstream 2.0kb upstream 2000 false Chr11: 29177937-29179936 Eucalyptus grandis
Eucgr.K02132 2.0kb downstream 2.0kb downstream 6303 true Chr11: 29179937-29186239 Eucalyptus grandis
Eucgr.K02132 2.0kb downstream 2.0kb downstream 2000 false Chr11: 29184240-29186239 Eucalyptus grandis
Eucgr.K02132 5.0kb upstream 5.0kb upstream 9303 true Chr11: 29174937-29184239 Eucalyptus grandis
Eucgr.K02132 5.0kb upstream 5.0kb upstream 5000 false Chr11: 29174937-29179936 Eucalyptus grandis
Eucgr.K02132 5.0kb downstream 5.0kb downstream 9303 true Chr11: 29179937-29189239 Eucalyptus grandis
Eucgr.K02132 5.0kb downstream 5.0kb downstream 5000 false Chr11: 29184240-29189239 Eucalyptus grandis
Eucgr.K02132 10.0kb upstream 10.0kb upstream 14303 true Chr11: 29169937-29184239 Eucalyptus grandis
Eucgr.K02132 10.0kb upstream 10.0kb upstream 10000 false Chr11: 29169937-29179936 Eucalyptus grandis
Eucgr.K02132 10.0kb downstream 10.0kb downstream 14303 true Chr11: 29179937-29194239 Eucalyptus grandis
Eucgr.K02132 10.0kb downstream 10.0kb downstream 10000 false Chr11: 29184240-29194239 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061290 5270 Rosid View MSA
123751309 5271 Pentapetalae View MSA
122795066 5272 Eudicot View MSA
122049730 5273 Angiosperm View MSA
121351180 5274 Embryophyte View MSA
123426443 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.9167 0.0 90.4688 High  
cufflinks 15.334 0.0 34.6831   Low
cufflinks 31.0749 0.0 93.8676 High  
cufflinks 26.8195 0.0 80.1383    
cufflinks 31.6273 0.0 72.452    
cufflinks 26.0826 0.0 58.6292    

0 Strain